best val_rmse 0.4433
Browse files- config.json +27 -2
- pytorch_model.bin +1 -1
config.json
CHANGED
|
@@ -1,5 +1,5 @@
|
|
| 1 |
{
|
| 2 |
-
"best_val_loss": 0.
|
| 3 |
"comet_ai_key": null,
|
| 4 |
"context_observations": {
|
| 5 |
"add_rem": true,
|
|
@@ -17,7 +17,7 @@
|
|
| 17 |
"route": "oral",
|
| 18 |
"time": 0.0
|
| 19 |
},
|
| 20 |
-
"experiment_dir": "/home/cesarali/Pharma/generative_pk/results/comet/node_pk_compartments/
|
| 21 |
"experiment_indentifier": null,
|
| 22 |
"experiment_name": "node_pk_compartments",
|
| 23 |
"hf_model_card_path": [
|
|
@@ -31,6 +31,10 @@
|
|
| 31 |
0.01,
|
| 32 |
0.1
|
| 33 |
],
|
|
|
|
|
|
|
|
|
|
|
|
|
| 34 |
"drug_id_options": [
|
| 35 |
"Drug_A",
|
| 36 |
"Drug_B",
|
|
@@ -40,18 +44,34 @@
|
|
| 40 |
0.01,
|
| 41 |
0.1
|
| 42 |
],
|
|
|
|
|
|
|
|
|
|
|
|
|
| 43 |
"k_a_tmag_range": [
|
| 44 |
0.01,
|
| 45 |
0.1
|
| 46 |
],
|
|
|
|
|
|
|
|
|
|
|
|
|
| 47 |
"k_e_tmag_range": [
|
| 48 |
0.01,
|
| 49 |
0.1
|
| 50 |
],
|
|
|
|
|
|
|
|
|
|
|
|
|
| 51 |
"k_p1_tmag_range": [
|
| 52 |
0.01,
|
| 53 |
0.1
|
| 54 |
],
|
|
|
|
|
|
|
|
|
|
|
|
|
| 55 |
"log_V_mean_range": [
|
| 56 |
-1.5,
|
| 57 |
1.5
|
|
@@ -100,6 +120,10 @@
|
|
| 100 |
1,
|
| 101 |
3
|
| 102 |
],
|
|
|
|
|
|
|
|
|
|
|
|
|
| 103 |
"solver_method": "rk4",
|
| 104 |
"time_num_steps": 100,
|
| 105 |
"time_start": 0.0,
|
|
@@ -198,6 +222,7 @@
|
|
| 198 |
"num_batch_plot": 1,
|
| 199 |
"num_workers": 3,
|
| 200 |
"optimizer_name": "AdamW",
|
|
|
|
| 201 |
"scheduler_name": "CosineAnnealingLR",
|
| 202 |
"scheduler_params": {
|
| 203 |
"T_max": 1000,
|
|
|
|
| 1 |
{
|
| 2 |
+
"best_val_loss": 0.4433233141899109,
|
| 3 |
"comet_ai_key": null,
|
| 4 |
"context_observations": {
|
| 5 |
"add_rem": true,
|
|
|
|
| 17 |
"route": "oral",
|
| 18 |
"time": 0.0
|
| 19 |
},
|
| 20 |
+
"experiment_dir": "/home/cesarali/Pharma/generative_pk/results/comet/node_pk_compartments/803452f598674599b78ffdb2865cca81",
|
| 21 |
"experiment_indentifier": null,
|
| 22 |
"experiment_name": "node_pk_compartments",
|
| 23 |
"hf_model_card_path": [
|
|
|
|
| 31 |
0.01,
|
| 32 |
0.1
|
| 33 |
],
|
| 34 |
+
"V_tscl_range": [
|
| 35 |
+
1.0,
|
| 36 |
+
5.0
|
| 37 |
+
],
|
| 38 |
"drug_id_options": [
|
| 39 |
"Drug_A",
|
| 40 |
"Drug_B",
|
|
|
|
| 44 |
0.01,
|
| 45 |
0.1
|
| 46 |
],
|
| 47 |
+
"k_1p_tscl_range": [
|
| 48 |
+
1.0,
|
| 49 |
+
5.0
|
| 50 |
+
],
|
| 51 |
"k_a_tmag_range": [
|
| 52 |
0.01,
|
| 53 |
0.1
|
| 54 |
],
|
| 55 |
+
"k_a_tscl_range": [
|
| 56 |
+
1.0,
|
| 57 |
+
5.0
|
| 58 |
+
],
|
| 59 |
"k_e_tmag_range": [
|
| 60 |
0.01,
|
| 61 |
0.1
|
| 62 |
],
|
| 63 |
+
"k_e_tscl_range": [
|
| 64 |
+
1.0,
|
| 65 |
+
5.0
|
| 66 |
+
],
|
| 67 |
"k_p1_tmag_range": [
|
| 68 |
0.01,
|
| 69 |
0.1
|
| 70 |
],
|
| 71 |
+
"k_p1_tscl_range": [
|
| 72 |
+
1.0,
|
| 73 |
+
5.0
|
| 74 |
+
],
|
| 75 |
"log_V_mean_range": [
|
| 76 |
-1.5,
|
| 77 |
1.5
|
|
|
|
| 120 |
1,
|
| 121 |
3
|
| 122 |
],
|
| 123 |
+
"rel_ruv_range": [
|
| 124 |
+
0.05,
|
| 125 |
+
0.3
|
| 126 |
+
],
|
| 127 |
"solver_method": "rk4",
|
| 128 |
"time_num_steps": 100,
|
| 129 |
"time_start": 0.0,
|
|
|
|
| 222 |
"num_batch_plot": 1,
|
| 223 |
"num_workers": 3,
|
| 224 |
"optimizer_name": "AdamW",
|
| 225 |
+
"persistent_workers": true,
|
| 226 |
"scheduler_name": "CosineAnnealingLR",
|
| 227 |
"scheduler_params": {
|
| 228 |
"T_max": 1000,
|
pytorch_model.bin
CHANGED
|
@@ -1,3 +1,3 @@
|
|
| 1 |
version https://git-lfs.github.com/spec/v1
|
| 2 |
-
oid sha256:
|
| 3 |
size 168701
|
|
|
|
| 1 |
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:4e006a32e82f30e60858bea9620c0d332b9a08771924b326e2c395cd2f3ba8ce
|
| 3 |
size 168701
|