In the second season, Kipo learns she was experimented with mute DNA by her parents before her birth, turning her into a half-human, half-jaguar hybrid, and that her mother Song, previously thought to be deceased, is actually the mega monkey who destroyed her burrow, mutated as a side effect from her pregnancy and mind-controlled with Scarlemagne's pheromones by Dr. Emilia, her parents' former employer who now leads a resistance group against mutes. She also discovers that Scarlemagne was originally an ordinary mandrill named Hugo whom Kipo's parents turned sentient and secretly raised as their son, but grew to hate them after they were forced to abandon him. Kipo frees Song from her mind control and defeats Scarlemagne, while Emilia plots to revert mutes back into normal animals.
