Upon his retirement as a player, he became a minor league manager for the Minnesota Twins. In 1999 he was named as the best Double-A managerial prospect by Baseball America. He left the Twins organization after the 2000 season; he interviewed with the Phillies for their vacant managerial spot, but the job went to Larry Bowa. Eventually he re-joined the Minnesota Twins as manager of the Edmonton Trappers. In 2002 Russell led Edmonton to a Pacific Coast League title, and was again honored by Baseball America, being named the best managerial prospect in the minors. The following year he was named the Pirates third-base coach, a job he held from 2003 to 2005. Russell was unpopular among some Pirates fans because of the frequency of runners he waved home that were thrown out at the plate. He was eventually fired, along with the rest of Lloyd McClendon's coaching staff, in 2005. After being fired Russell was named as manager of the Phillies AAA team, the Scranton/Wilkes-Barre Red Barons, a position he held through 2006, until the Phillies switched affiliates to the Ottawa Lynx in 2007, with Russell still at the helm.
