At Wolfsburg, Bernauer would go on to win one league title and three German cups. In Europe, Bernauer would reach two Champions League finals and one semi-final during her stay with the club. The 2016 Champions League final saw Bernauer substituted in the 73rd minute, meaning she missed out on the chance to take a penalty in Wolfsburg's eventual shootout defeat to Lyon. The 2018 Champions League final saw Bernauer miss the game after picking up a major knee injury in the spring of 2018, while on international duty with Switzerland.
