The current Unicode charts, and some fonts, use empty circles to indicate dots that are not punched. This does not always render very clearly: if the circle outlines are printed heavily then it can be difficult to tell at a glance whether the dot is filled in or not. The braille package for LaTeX (and several printed publications such as the printed manual for the new international braille music code) show unpunched dots as very small dots (much smaller than the filled-in dots) rather than circles, and this tends to print better.
