6.3</b> Mapping all 22 pairs of trimmed FASTQ files using a SLURM job array</a></li>
</ul></li>
<li class="chapter" data-level="27.7" data-path="example-wgs-flow.html"><a href="example-wgs-flow.html#step-3.-mark-duplicates-in-bam-files-from-each-individual-and-run-samtools-stats-on-the-results"><i class="fa fa-check"></i><b>27.7</b> Step 3. Mark duplicates in BAM files from each individual, and run <code>samtools stats</code> on the results</a>
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<li class="chapter" data-level="27.7.1" data-path="example