  score_method-&gt;uses_hbond_surfaces());
<a name="l00435"></a>00435     A_model-&gt;inverse_transform(top_align-&gt;R, top_align-&gt;T,
<a name="l00436"></a>00436                                score_method-&gt;uses_surface_mesh(),
<a name="l00437"></a>00437                                score_method-&gt;uses_hbond_surfaces());
<a name="l00438"></a>00438     top_align-&gt;score = score_method-&gt;score(*A_model, *dset_site, &amp;(*top_align));
<a name="l00439"></a>00439     top_align-&gt;score = (top_ali