lass="va">cm</span>, lower <span class="op">=</span> <span class="fl">0</span>, upper <span class="op">=</span> <span class="fl">1</span><span class="op">)</span></span></code></pre></div>
    </div>

    <div class="section level2">
    <h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>


<dl><dt id="arg-cm">cm<a class="anchor" aria-label="anchor" href="#arg-cm"></a></dt>
<dd><p>consensus matrix. Should be symmetric and values between 0
and 1.</p></dd>


<dt id="a