w indices (individuals) that
are used. If not specified, all rows are used.<br><strong>Don't use negative indices.</strong></p></dd>


<dt>ind.col</dt>
<dd><p>An optional vector of the column indices (SNPs) that are used.
If not specified, all columns are used.<br><strong>Don't use negative indices.</strong></p></dd>


<dt>nploidy</dt>
<dd><p>Number of trials, parameter of the binomial distribution.
Default is <code>2</code>, which corresponds to diploidy, such as for the human genome.</p></dd>


<dt>ncores