arge])</li>
</ul>
</div>
<div class="section level3">
<h3 id="maxquant">MaxQuant<a class="anchor" aria-label="anchor" href="#maxquant"></a>
</h3>
<p>For <strong>flowTraceR</strong> the following files and respective columns are required:</p>
<ul>
<li>evidence.txt
<ul>
<li>Modified sequence (User Manual definition: Sequence representation including the post-translational modifications)</li>
<li>Charge (User Manual definition: The charge-state of the precursor ion)</li>
<li>Protein group IDs (User Manual defi