="ex">snpEff</span> ann <span class="at">-c</span> resources/SnpEff/snpEff.config  Pearl_Millet_v1.1 chr2_bit.vcf.gz <span class="op">&gt;</span> chr2_bit_annotated.vcf</span></code></pre></div>
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<div id="boneyard-2" class="section level2 hasAnchor" number="25.1">
<h2><span class="header-section-number">25.1</span> Boneyard<a href="variant-annotation.html#boneyard-2" class="anchor-section" aria-label="Anchor link to header"></a></h2>
<p>However, I will be more interested in understanding what annotati