rot,
--tsl, --appris, --gene_phenotype --af, --af_1kg, --af_esp, --af_gnomad,
--max_af, --pubmed, --variant_class</p></td>
    </tr>
    <tr>
      <th>extra.params</th>
      <td><p>Extra paramters in vep command</p></td>
    </tr>
    <tr>
      <th>debug</th>
      <td><p>If set TRUE, only print the command</p></td>
    </tr>
    </table>


    <h2 class="hasAnchor" id="examples"><a class="anchor" href="#examples"></a>Examples</h2>
    <pre class="examples"><div class='input'><span class='fu'>vep</span>(