dd>
<p>
specify type of index, one of: esa|pck|encseq. Where encseq is an encoded sequence and an enhanced suffix array will be constructed only in memory. (default: encseq)
</p>
</dd>
<dt class="hdlist1">
<strong>-indexname</strong> [<em>string</em>]
</dt>
<dd>
<p>
Basename of encseq to construct. (default: undefined)
</p>
</dd>
<dt class="hdlist1">
<strong>-unitfile</strong> [<em>filename</em>]
</dt>
<dd>
<p>
specifies genomic units, see below for description. (default: undefined)
</p>
