resources/genome.fasta.fai <span class="va">$i</span> <span class="kw">|</span> <span class="ex">bcftools</span> view <span class="at">-Oz</span> <span class="at">-</span>  <span class="op">&gt;</span> <span class="va">$i</span>.gz<span class="kw">;</span> <span class="cf">done</span></span></code></pre></div>
<p>Then concatenate all of those:</p>
<div class="sourceCode" id="cb713"><pre class="sourceCode sh"><code class="sourceCode bash"><span id="cb713-1"><a href="variant-annotation.html#cb713-1" tabindex=