 the minimum fragment size is greater than zero, we require each</span>
<a name="l00677"></a>00677       <span class="comment">// dbase entry to have a valid ligand file</span>
<a name="l00678"></a>00678       <span class="keywordflow">if</span>(<a class="code" href="classSimSite3D_1_1ScoreRigidAlignments.html#f68d236f77307b8d5e4eed409aa573ce">A_min_num_atoms</a> &gt; 0){
<a name="l00679"></a>00679         <span class="keywordflow">if</span>(lig_fname == <span class="stringliteral">"NONE"</span>){
<a name="