class="comment">// assuming A_min_num_atoms is 0 (currently the definition of an </span>
<a name="l00742"></a>00742       <span class="comment">// empty pocket search)</span>
<a name="l00743"></a>00743       <span class="keywordflow">if</span>(tmp_frag-&gt;<a class="code" href="classSimSite3D_1_1mol2File.html#ac4b079f975345f69ad63b689f6bb3f5">num_heavy_atoms</a>() &lt; <a class="code" href="classSimSite3D_1_1ScoreRigidAlignments.html#f68d236f77307b8d5e4eed409aa573ce">A_min_num_atoms</a>){
<a name="l00744"><