typeCaller and getting one gVCF for each sample</a></li>
<li class="chapter" data-level="20.2.2" data-path="variant-calling.html"><a href="variant-calling.html#gvcf-format"><i class="fa fa-check"></i><b>20.2.2</b> gVCF files</a></li>
<li class="chapter" data-level="20.2.3" data-path="variant-calling.html"><a href="variant-calling.html#genomics-db"><i class="fa fa-check"></i><b>20.2.3</b> The Genomics Data Base</a></li>
<li class="chapter" data-level="20.2.4" data-path="variant-calling.html"><a href="variant