</span>/genetic_map_chr1_combined_b36.txt \
        -l ex.leg \
        -h <span class="va">$hapdir</span>/CEU.0908.chr1.hap \
        -o genotypes_hapgen \
        -n 100 0 \
        -dl 45162 0 0 0 \
        -no_haps_output</code></pre></div>
<div id="refs" class="references">
<div id="ref-Chang2015">
<p>1. Chang CC, Chow CC, Tellier LC, Vattikuti S, Purcell SM, Lee JJ. Second-generation PLINK: rising to the challenge of larger and richer datasets. GigaScience. 2015;4: 7. doi:<a href="https://doi.org/10.1