ass="n">Shapemers</span>
    <span class="sd">&quot;&quot;&quot;</span>
<span class="sd">    List of shapemers found</span>
<span class="sd">    &quot;&quot;&quot;</span>
    <span class="n">proteins_to_shapemer_residue_indices</span><span class="p">:</span> <span class="n">Dict</span><span class="p">[</span><span class="n">ProteinKey</span><span class="p">,</span> <span class="n">Shapemers</span><span class="p">]</span>
    <span class="sd">&quot;&quot;&quot;</span>
<span class="sd">    Maps each protein t