ds from VCF file</a>
</li>
<li>
<a href="#toc_3">Applying rare-variant analysis</a>
</li>
<li>
<a href="#toc_4">Contact</a>
</li>
</ul>
</li>
</ul>
</div>


<h1 id="toc_0">SeqMiner Quick Guide</h1>

<p>SeqMiner(former name, vcf2geno) is a R package that helps you efficiently processing sequencing data in the <a href="https://samtools.github.io/hts-specs/VCFv4.2.pdf">VCF format</a>.</p>

<p>SeqMiner requires VCF files indexed by Tabix. To use its gene based extraction, VCF need to be annotated by <a href="ht