</span>
<span class="sd">    end_i : int</span>
<span class="sd">        Index of last position in first sequence</span>
<span class="sd">        (used for verification purposes only)</span>
<span class="sd">    seq_j : str</span>
<span class="sd">        Second aligned sequence</span>
<span class="sd">    start_j : int</span>
<span class="sd">        Index of first position in second sequence</span>
<span class="sd">    end_j : int</span>
<span class="sd">        Index of last position in second sequence</