ps://www.sanger.ac.uk/tool/pindel/">Pindel</a> Pindel is a tool that uses a pattern growth approach to detect breakpoints of large deletions, medium size insertion/inversion, tandem duplications.
- <a href="https://github.com/nygenome/lancet">Lancet</a> This is a newer variant calling tool that uses colored de Bruijn graphs to jointly analyze tumor and normal pairs, offering strong indel detection. More information about the processes used in this variant calling tool can be found <a href="https://www.natur