ink</code></pre></div>
</div>
<div id="coalescent-simulation-via-genome" class="section level2">
<h2>Coalescent simulation via Genome</h2>
<p>Download <a href="http://csg.sph.umich.edu/liang/genome/download.html">GENOME</a> and create a folder for the GENOME output files. The example below uses GENOME to simulate genetic data for a population comprised of three sub-populations with 30, 30 and 40 samples. The simulated POPULATION PROFILE, SNP positions and the genotypes are all saved in genotypes_genome.txt.