 As a result unphysical structures with
long or short bonds, or overlapping atoms may be produced. Visual
inspection, and energy minimization may be necessary to
validate the structure.
<P>
<H3>Files</H3>
<TABLE BORDER=1 CELLSPACING=0 CELLPADDING=2>
<TR><TH>option</TH><TH>filename</TH><TH>type</TH><TH>description</TH></TR>
<TR><TD ALIGN=RIGHT> <b><tt>-f</tt></b> </TD><TD ALIGN=RIGHT> <tt><a href="pdb.html">  dyndom.pdb</a></tt> </TD><TD> Input </TD><TD> Protein data bank file </TD></TR>
<TR><TD ALIGN=RIGHT>