d
## [1] &quot;NA12286&quot; &quot;NA12341&quot; &quot;NA12342&quot;
</code></pre>

<p>There are 7 parameters in <em>readVCFToListByGene</em>: 
1. VCF file path
2. Gene definition file (refFlat foramt)
3. Character array of gene names (can be one gene or more than one gene names)
4. Annotation type
5. VCF field to extract (explain later)
6. VCF tags in the INFO field to extract (explain later)
7. VCF tags in the individual field to extract (explain later)</p>

<p>The last three parameter are closely related