<span class="math inline">\(H_a\)</span> : Association of a variant
other than the query variant with the query trait (Q-1
configurations)</p>
<p><span class="math inline">\(H_c\)</span> : Association of the query
variant with the query trait (1 configuration)</p>
<p>with <span class="math inline">\(p_n\)</span>, <span class="math inline">\(p_a\)</span> and <span class="math inline">\(p_c\)</span> being their corresponding priors.</p>
</div>
<div class="section level4">
<h4 id="cophescan-approaches">CoPheSc