sage"></a></h2>
    <div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">get_read_counts</span><span class="op">(</span></span>
<span>  <span class="va">asv_abund_matrix</span>,</span>
<span>  <span class="va">temp_directory_path</span>,</span>
<span>  <span class="va">output_directory_path</span>,</span>
<span>  <span class="va">metabarcode</span></span>
<span><span class="op">)</span></span></code></pre></div>
    </div>

    <div class="section level2">
    <h2 id="arguments">Ar