!-- pkgdown --><script src="../pkgdown.js"></script><meta property="og:title" content="Cluster SNPs with HDBSCAN and identify haplotypes — run_hdbscan_haplotyping"><meta property="og:description" content="run_hdbscan_haplotyping() performs HDBSCAN clustering of SNPs in region of
interest to identify marker groups. Individuals are classified by haplotype
combination based on shared combinations of marker group alleles. Returns a
comprehensive haplotyping object (HapObject), which can be visualized with ref