lass="op">$</span><span class="va">CellStates</span>, contrast <span class="op">=</span> <span class="st">"disease"</span>, random_effects <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/c.html">c</a></span><span class="op">(</span><span class="st">"plate"</span>, 
    <span class="st">"lane"</span>, <span class="st">"sample"</span><span class="op">)</span><span class="op">)</span></code></pre></div>
<p>MASC results reveals that fibroblasts, plasma cells and B memory cells are enr