obabilities</a></li><li class="chapter-item expanded "><a href="intro_summary.html"><strong aria-hidden="true">1.5.</strong> Summarizing a modBAM</a></li><li class="chapter-item expanded "><a href="intro_stats.html"><strong aria-hidden="true">1.6.</strong> Calculating modification statistics in regions</a></li><li class="chapter-item expanded "><a href="intro_call_mods.html"><strong aria-hidden="true">1.7.</strong> Calling mods in a modBAM</a></li><li class="chapter-item expanded "><a href="intro_edge_filte