ref="https://rdrr.io/pkg/GetoptLong/man/qq.html" class="external-link">qq</a></span><span class="op">(</span><span class="st">"samtools sort @{bam} ... "</span><span class="op">)</span>, name <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/pkg/GetoptLong/man/qq.html" class="external-link">qq</a></span><span class="op">(</span><span class="st">"sort_@{basename(bam)}"</span><span class="op">)</span>, </span>
<span>        memory <span class="op">=</span> <span class="va">...</span>, cores 