e></div>
    </div>

    <div class="section level2">
    <h2 id="arguments">Arguments<a class="anchor" aria-label="anchor" href="#arguments"></a></h2>
    <dl><dt>refvec</dt>
<dd><p>A vector of non-negative integers. The number of
reference reads observed in the individuals</p></dd>


<dt>sizevec</dt>
<dd><p>A vector of positive integers. The total number of
reads in the individuals.</p></dd>


<dt>ploidy</dt>
<dd><p>A non-negative integer. The ploidy of the species.</p></dd>


<dt>p1ref</dt>
<dd><p>A vect