import</span> <span class="n">batch_run</span>

<span class="kn">from</span> <span class="nn">numpy</span> <span class="kn">import</span> <span class="n">log</span>
<span class="kn">import</span> <span class="nn">re</span>

<span class="c1">#load the model</span>
<span class="n">task_model</span> <span class="o">=</span> <span class="n">read_sbml_model</span><span class="p">(</span><span class="s1">&#39;data/Recon3D_301_consistent.xml&#39;</span><span class="p">)</span>

<span class="c1">#load the reconstru