class="c1"># Make sure we log2 the values since they&#39;re too diffuse</span>
<span class="n">vae_df</span> <span class="o">=</span> <span class="n">pd</span><span class="o">.</span><span class="n">DataFrame</span><span class="p">()</span>
<span class="n">vae_df</span><span class="p">[</span><span class="s1">&#39;external_gene_name&#39;</span><span class="p">]</span> <span class="o">=</span> <span class="n">df</span><span class="p">[</span><span class="s1">&#39;external_gene_name&#39;</span><span class="p"