</dd>


<dt>title</dt>
<dd><p>Plot title. If NULL gene name is used</p></dd>


<dt>logTransform</dt>
<dd><p>Whether to perform a log10 transform on the y axis</p></dd>


<dt>shapes</dt>
<dd><p>The marker shapes (default=19)</p></dd>


<dt>colours</dt>
<dd><p>The marker colours as vector</p></dd>


<dt>lineColours</dt>
<dd><p>The line colours (default='grey60') as vector</p></dd>


<dt>markerSize</dt>
<dd><p>Size of markers (default=1)</p></dd>


<dt>fontSize</dt>
<dd><p>Plot font size</p></dd>


<dt>alpha</