logy -l lig1.pdb lig3.pdb -p protein.pdb --lambdas 24</pre>
<p> 
you will initiate 24 &lambda;-values rather than default 16. You can also give individual &lambda;-values to the argument. For instance
<p>
<pre>python $PROTOMSHOME/protoms.py -s dualtopology -l lig1.pdb lig3.pdb -p protein.pdb --lambdas 0.000 0.033 0.067 0.133 0.200 0.267 0.333 0.400 0.467 0.533 0.600 0.667 0.733 0.800 0.867 0.933 0.967 1.000</pre>
<p> 
will add two new &lambda;-values at 0.033 and 0.967 to the 16 created by default.
<p>
<h5>