l1">
<h1>File 1: mutation information file (mandatory)</h1>
<p>This tsv or tsv.gz file should contain at least these columns: Sample
Mut_type Chr Pos Ref Alt SimpleRepeat_TRF Neighborhood_sequence<br />
sample_name 1-snv chr1 108130741 C T N
CTACCTGGAGAATGGGCCCATGTGTCCAGGTAGCAGTAAGC<br />
SimpleRepeat_TRF: Whether the mutation locates at a simple repeat
sequence or not (“Y” or “N”).<br />
Neighborhood_sequence: [5’-20 bases] + [Alt sequence] + [3’-20
bases]<br />
Sample, Mut_type, Chr, Pos, Ref,