Puritans
Ecclesiology

While the Puritans were united in their goal of furthering the English Reformation, they were always divided over issues of ecclesiology and church polity, specifically questions relating to the manner of organizing congregations, how individual congregations should relate with one another and whether established national churches were scriptural. On these questions, Puritans divided between supporters of episcopal polity, presbyterian polity and congregational polity.

The episcopalians (known as the prelatical party) were conservatives who supported retaining bishops if those leaders supported reform and agreed to share power with local churches. They also supported the idea of having a Book of Common Prayer, but they were against demanding strict conformity or having too much ceremony. In addition, these Puritans called for a renewal of preaching, pastoral care and Christian discipline within the Church of England.

Like the episcopalians, the presbyterians agreed that there should be a national church but one structured on the model of the Church of Scotland. They wanted to replace bishops with a system of elective and representative governing bodies of clergy and laity (local sessions, presbyteries, synods, and ultimately a national general assembly). During the Interregnum, the presbyterians had limited success at reorganizing the Church of England. The Westminster Assembly proposed the creation of a presbyterian system, but the Long Parliament left implementation to local authorities. As a result, the Church of England never developed a complete presbyterian hierarchy.

Congregationalists or Independents believed in the autonomy of the local church, which ideally would be a congregation of "visible saints" (meaning those who had experienced conversion). Members would be required to abide by a church covenant, in which they "pledged to join in the proper worship of God and to nourish each other in the search for further religious truth". Such churches were regarded as complete within themselves, with full authority to determine their own membership, administer their own discipline and ordain their own ministers. Furthermore, the sacraments would only be administered to those in the church covenant.

Most congregational Puritans remained within the Church of England, hoping to reform it according to their own views. The New England Congregationalists were also adamant that they were not separating from the Church of England. However, some Puritans equated the Church of England with the Roman Catholic Church, and therefore considered it no Christian church at all. These groups, such as the Brownists, would split from the established church and become known as Separatists. Other Separatists embraced more radical positions on separation of church and state and believer's baptism, becoming early Baptists.
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