information:extraction
Aftermath and deposition

The peace agreement was sealed with a dinner at Linköping Castle on 28 September. Both sides agreed to lay down arms and send the troops back to their home provinces, except for the King's personal guard. Charles' appointments were to be recognized and a parliament was to be called to settle any disputes. The King, who was under pressure, fearing for his life without his army and having realised that he had lost the political battle, fled with his sister during the coming days to Poland. At the same time as the peace treaty was being signed in Linköping, conflicts were taking place in Dalarna. There, a pro-Sigismund bailiff, Jacob Näf, had tried to raise up the Dalecarlians against Duke Charles. Chaos ensued, Näf was executed, and the Dalecarlians set out on a campaign in 1598, burning and killing down to Brunnbäck ferry. In Västergötland, Carl Carlsson Gyllenhielm, illegitimate son of Duke Charles, defeated the rebellion. A number of Swedes who had sided with Sigismund, including his council supporters, were handed over to Charles as part of the peace settlement. They were later killed in the Linköping Bloodbath of 1600.

Sigismund was officially deposed from the throne of Sweden by a Riksdag held in Stockholm on 24 July 1599. He was given six (or twelve depending on source) months to send his son, Prince Ladislaus (Władysław) Vasa, to Sweden as his successor, under the condition that the boy would be brought up in the Protestant faith. In February 1600, Duke Charles summoned the Estates of the Realm to Linköping. Since Sigismund had not provided a reply, the Estates elected Duke Charles as King apparent, however he would not become Charles IX until his coronation four years later. During the winter and spring of 1600, Charles also occupied the Swedish part of Estonia, as the castle commanders had shown sympathies towards Sigismund.