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Inflow and outflow

Water flows through the Strait more or less continuously, both eastwards and westwards. A smaller amount of deeper, saltier and therefore denser waters continually flow westwards (the Mediterranean outflow), while a larger amount of surface waters with lower salinity and density continually flow eastwards (the Mediterranean inflow). These general flow tendencies may be occasionally interrupted for brief periods by temporary tidal flows, depending on various lunar and solar alignments. The balance of the water flow is eastwards, since the evaporation rate within the Mediterranean basin is higher than the combined inflow of all the rivers that empty into it, plus the total precipitation of rain or snow that falls on it. At the Strait's far western end is the Camarinal Sill, the Strait's shallowest point which limits mixing between the cold, less saline Atlantic water and the warmer, more saline Mediterranean waters.

The Mediterranean waters are so much saltier than the Atlantic waters that they sink below the constantly incoming water and form a highly saline (thermohaline, both warm and salty) layer of bottom water. This layer of bottom-water constantly works its way out into the Atlantic as the Mediterranean outflow. On the Atlantic side of the Strait, a density boundary separates the Mediterranean outflow waters from the rest at about 100 m (330 ft; 55 fathoms) depth. These waters flow out and down the continental slope, losing salinity, until they begin to mix and equilibrate more rapidly, much farther out at a depth of about 1,000 m (3,300 ft; 550 fathoms). The Mediterranean outflow water layer can be traced for thousands of kilometres west of the Strait, before completely losing its identity.

During the Second World War, German U-boats used the currents to pass into the Mediterranean Sea without detection, by maintaining silence with engines off. From September 1941 to May 1944 Germany managed to send 62 U-boats into the Mediterranean. All these boats had to navigate the British-controlled Strait of Gibraltar where nine U-boats were sunk while attempting passage and 10 more had to break off their run due to damage.