Published November 18, 2020 | Version 1
Journal article Open

ANN: A platform to annotate text with Wikidata IDs

  • 1. Department of Clinical and Toxicological Analyses, School of Pharmaceutical Sciences, University of São Paulo, São Paulo, Brazil
  • 2. ILCC, University of Edinburgh, UK
  • 3. Cellular and Molecular Cardiology Laboratory, Biophysics Institute, Federal University of Rio de Janeiro, Brazil
  • 4. European Molecular Biology Laboratory - European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridgeshire, CB10 1SD, UK
  • 5. Planar Polarity and Plasticity lab, University of Bordeaux, INSERM, Neurocentre Magendie, U1215, F-3300 Bordeaux, France
  • 6. QUEST Center for Transforming Biomedical Research, Berlin Institute of Health (BIH), Berlin, Germany, Charite ́- Universitätsmedizin Berlin, Berlin, Germany
  • 7. None
  • 8. Immunogenomics & Systems Biology Lab, Institute of Life Sciences, Bhubaneswar
  • 9. Department of Molecular Neurobiology, Max Planck Institute of Experimental Medicine, 37075 Göttingen, Germany

Description

Report of the work done by the Ann team at the eLife Sprint 2020. 
It describes the effort pursued towards a system for universal annotation of biomedical articles using the collaborative knowledge graph of Wikidata.  

The project is currently active at https://github.com/lubianat/ann

Files

ann_sprint.pdf

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