From detlef.steuer at hsu-hamburg.de  Mon Mar 17 11:13:13 2008
From: detlef.steuer at hsu-hamburg.de (Detlef Steuer)
Date: Mon, 17 Mar 2008 11:13:13 +0100
Subject: [Rd] Problems building rpm for R-2.6.2 on Opensuse Factory
Message-ID: <20080317111313.65aa0b1a@renner>

Hi,

make check fails in the way shown below when I try to build
R-2.6.2 on OpenSuSE Factory x86_64. It builds fine on i586.
(and on all older Versions of Opensuse)

Is there something I can do?
Are there known problems with some gcc versions?
(Factory uses 4.3.0)

Output from ./configure is
-------------------------------------------------------------
R is now configured for x86_64-unknown-linux-gnu

Source directory: .
Installation directory: /usr

C compiler: gcc -std=gnu99 -g -O2
Fortran 77 compiler: gfortran -g -O2

C++ compiler: g++ -g -O2
Fortran 90/95 compiler: gfortran -g -O2
Obj-C compiler:

Interfaces supported: X11, tcltk
External libraries: readline
Additional capabilities: PNG, JPEG, iconv, MBCS, NLS
Options enabled: shared R library, shared BLAS, R profiling

Recommended packages: yes
-------------------------------------------------------------

It may very well be an error on the Opensuse side, but I'm  just not
sure how to identify the true cause of the problem.
Any help appreciated.

Detlef

-----------------------------------------------------------------  
Error message:

running code in 'lapack.R' ... OK
comparing 'lapack.Rout' to './lapack.Rout.save' ... OK
make[3]: Leaving directory `/usr/src/packages/BUILD/R-2.6.2/tests'
make[2]: Leaving directory `/usr/src/packages/BUILD/R-2.6.2/tests'
make[2]: Entering directory `/usr/src/packages/BUILD/R-2.6.2/tests'
running regression tests
make[3]: Entering directory `/usr/src/packages/BUILD/R-2.6.2/tests'
running code in 'reg-tests-1.R' ... OK
running code in 'reg-tests-2.R' ... OK
comparing 'reg-tests-2.Rout' to './reg-tests-2.Rout.save' ...1318c1318
< 0.1230 -0.7187
---
> 0.1230 0.3170
1328c1328
< 0.1230 -0.7187
---
> 0.1230 0.3170
1356c1356
< -0.2364 -0.3594
---
> 0.2814 0.1585
1366c1366
< 0.62010 -0.55327 -0.15379 0.02127
---
> 0.49064 -0.68273 -0.02433 0.15074
1375c1375
< 1.17337 0.06683 -0.15379 0.02127
---
> 1.17337 -0.19209 -0.02433 0.15074
make[3]: *** [reg-tests-2.Rout] Error 1
make[3]: Leaving directory `/usr/src/packages/BUILD/R-2.6.2/tests'
make[2]: *** [test-Reg] Error 2
make[2]: Leaving directory `/usr/src/packages/BUILD/R-2.6.2/tests'
make[1]: *** [test-all-basics] Error 1
make[1]: Leaving directory `/usr/src/packages/BUILD/R-2.6.2/tests'
make: *** [check] Error 2
error: Bad exit status from /var/tmp/rpm-tmp.74662 (%build)



[Rd] Problems building rpm for R-2.6.2 on Opensuse Factory
Detlef Steuer