From Bernhard_Pfaff at fra.invesco.com  Thu Apr 21 15:04:02 2011
From: Bernhard_Pfaff at fra.invesco.com (Pfaff, Bernhard Dr.)
Date: Thu, 21 Apr 2011 14:04:02 +0100
Subject: [Rd] R CMD Sweave versus Sweave() on Windows
In-Reply-To: <alpine.LFD.2.02.1104211315010.4744@gannet.stats.ox.ac.uk>
References: <B89F0CE41D45644A97CCC93DF548C1C3285775E1@GBHENXMB02.corp.amvescap.net>
	<alpine.LFD.2.02.1104211315010.4744@gannet.stats.ox.ac.uk>
Message-ID: <B89F0CE41D45644A97CCC93DF548C1C3285775E2@GBHENXMB02.corp.amvescap.net>

> 
> On Thu, 21 Apr 2011, Pfaff, Bernhard Dr. wrote:
> 
> > Dear list subscriber,
> >
> > I am quite puzzled by the behaviour of processing Sweave 
> files within an R session, i.e.
> > Sweave("foo.Rnw") versus R CMD Sweave foo.Rnw
> >
> > In the former the environmental variable 
> 'SWEAVE_STYLEPATH_DEFAULT = 
> > TRUE' is obeyed (this is set in etc/Renviron.site as well 
> as under the 
> > users home directory in .Renviron). That is the hard-coded path to 
> > Sweave.sty is included in the resultant tex-file, whereas if the 
> > Sweave file is processed from cmd.exe as R CMD Sweave foo.Rnw, only 
> > \usepackage{Sweave} is included.
> >
> > Any pointers are much appreciated.
> 
> R CMD Sweave does not read the startup files.  Try runnning R 
> --vanilla and Sweave("foo.Rnw"): you will see the same.

Dear Prof. Ripley,

many thanks for your swift reply. This is indeed correct and educative --thanks for this; but now I am kind of curious where this different behaviour compared to version 2.12.0 has been announced or can be found? I have read the NEWS file and the Windows specific NEWS of the latest release, but was not able to find any pointer. That is, if I issue 'R CMD Sweave foo.Rnw' in cmd.exe with R version 2.12.0, the hard-coded path to Sweave.sty is included and hence environmental variables contained in the startup files are read.
Asked differently, is there a way such that R CMD Sweave does read the startup files under R 2.13.0? 

re: Kasper, many thanks for your reply. Incidentally, I have had 'Sys.setenv("SWEAVE_STYLEPATH_DEFAULT" = "TRUE")' directive already included in my .Rprofile, but as Prof. Ripley correcly pointed out, these settings are not taken effect.

Best,
Bernhard  



> 
> > Best,
> > Bernhard
> >
> > Output of sessionInfo():
> >> sessionInfo()
> > R version 2.13.0 (2011-04-13)
> > Platform: i386-pc-mingw32/i386 (32-bit)
> >
> > locale:
> > [1] LC_COLLATE=German_Germany.1252  
> LC_CTYPE=German_Germany.1252 [3] 
> > LC_MONETARY=German_Germany.1252 LC_NUMERIC=C [5] 
> > LC_TIME=German_Germany.1252
> >
> > attached base packages:
> > [1] stats     graphics  datasets  grDevices utils     methods   base
> >
> > other attached packages:
> > [1] fortunes_1.4-1
> >
> >
> > Dr. Bernhard Pfaff
> > Director
> > Global Asset Allocation
> >
> > Invesco Asset Management Deutschland GmbH An der Welle 5
> > D-60322 Frankfurt am Main
> >
> > Tel: +49 (0)69 29807 230
> > Fax: +49 (0)69 29807 178
> > www.institutional.invesco.com
> > Email: bernhard_pfaff at fra.invesco.com
> >
> > Gesch?ftsf?hrer: Karl Georg Bayer, Bernhard Langer, Dr. Jens 
> > Langewand, Alexander Lehmann, Christian Puschmann
> > Handelsregister: Frankfurt am Main, HRB 28469 Sitz der 
> Gesellschaft: 
> > Frankfurt am Main
> >
> >
> > *****************************************************************
> > Confidentiality Note: The information contained in this 
> > ...{{dropped:10}}
> >
> > ______________________________________________
> > R-devel at r-project.org mailing list
> > https://stat.ethz.ch/mailman/listinfo/r-devel
> >
> 
> -- 
> Brian D. Ripley,                  ripley at stats.ox.ac.uk
> Professor of Applied Statistics,  http://www.stats.ox.ac.uk/~ripley/
> University of Oxford,             Tel:  +44 1865 272861 (self)
> 1 South Parks Road,                     +44 1865 272866 (PA)
> Oxford OX1 3TG, UK                Fax:  +44 1865 272595
> 



[Rd] R CMD Sweave versus Sweave() on Windows
Pfaff, Bernhard Dr.