From gb at stat.umu.se  Thu Aug 13 23:01:54 2009
From: gb at stat.umu.se (=?ISO-8859-1?Q?G=F6ran_Brostr=F6m?=)
Date: Thu, 13 Aug 2009 23:01:54 +0200
Subject: [Rd] CMD check error (bug?)
In-Reply-To: <1250196899.14994.22.camel@punchbuggy>
References: <1250196899.14994.22.camel@punchbuggy>
Message-ID: <4A847F42.4010403@stat.umu.se>

Terry Therneau skrev:
> R version 2.9.0 running on Centos (Red Hat linux).
> 
> I have a pair of packages coxme and bdsmatrix.  The latter is installed
> in my local library (I don't have permission for global install at
> work.)  That is, it is in the location pointed to in R_LIBS_USER. In R,
> the command library(bdsmatrix) works fine.
> 
> Coxme depends on bdsmatrix, in fact uses some cross-calls to it's C
> routines, which have been exported using the R_RegisterCCallable
> function.  All works as expected: modules load, tests succeed.
> 
> Running R CMD check fails however,
> 
> tmt703% R CMD check coxme
> * checking for working pdflatex ... OK
> * using log directory
> '/people/biostat2/therneau/research/surv/Rforge/pkg/coxme.Rcheck'
> * using R version 2.9.0 (2009-04-17)
> * using session charset: UTF-8
> * checking for file 'coxme/DESCRIPTION' ... OK
> * this is package 'coxme' version '1.0'
> * checking package name space information ... OK
> * checking package dependencies ... ERROR
> Packages required but not available:
>   bsdmatrix

Looks like a spelling error somewhere. The name is bdsmatrix (see above).

G?ran
> 
>  Is this an oversight in the check routine?
> 
> Terry T.
> 
> ______________________________________________
> R-devel at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-devel



[Rd] CMD check error (bug?)
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