From p.dalgaard at biostat.ku.dk  Wed Jul  5 11:50:27 2006
From: p.dalgaard at biostat.ku.dk (Peter Dalgaard)
Date: 05 Jul 2006 11:50:27 +0200
Subject: [Rd] read.table() errors with tab as separator (PR#9061)
In-Reply-To: <20060705093501.8275353DBA@slim.kubism.ku.dk>
References: <20060705093501.8275353DBA@slim.kubism.ku.dk>
Message-ID: <x2veqcmlcs.fsf@viggo.kubism.ku.dk>

John.Maindonald at anu.edu.au writes:

> (1) read.table(), with sep="\t", identifies 13 our of 1400 records,
> in a file with 1400 records of 3 fields each, as having only 2 fields.
> This happens under version 2.3.1 for Windows as well as with
> R 2.3.1 for Mac OS X, and with R-devel under Mac OS X.
> [R version 2.4.0 Under development (unstable) (2006-07-03 r38478)]
> 
> (2) Using read.table() with sep="\t", the first 1569 records only
> of a 1821 record file are input.  The file has exactly two fields
> in each record, and the minimum length of the second field is
> 1 character.  If however I extract lines 1561 to 1650 from the
> file (the file "short.txt" below), all 90 lines are input.

Notice that the single quote is a quote character in read.table (as
opposed to read.delim, which uses only the double quote, to cater for
TAB-separated files from Excel & friends).

> [1] "865\tlinear model (lm)! Cook's distance\t152"
                                   ^
                                 !!!!

(This reminds me that we probably should shift the default for
comment.char too since it leads to similar issues, but it seems not to
be the problem in this case.)

-- 
   O__  ---- Peter Dalgaard             ?ster Farimagsgade 5, Entr.B
  c/ /'_ --- Dept. of Biostatistics     PO Box 2099, 1014 Cph. K
 (*) \(*) -- University of Copenhagen   Denmark          Ph:  (+45) 35327918
~~~~~~~~~~ - (p.dalgaard at biostat.ku.dk)                  FAX: (+45) 35327907



[Rd] read.table() errors with tab as separator (PR#9061)
Peter Dalgaard