From brian at braverock.com  Fri Mar  4 16:36:41 2016
From: brian at braverock.com (Brian G. Peterson)
Date: Fri, 04 Mar 2016 09:36:41 -0600
Subject: [Rd] vignette index
In-Reply-To: <DABBA49CC8C7AA4B959D2D0FEE496D72519C92C6@EXINFRCHMB1P.ccmc.local>
References: <DABBA49CC8C7AA4B959D2D0FEE496D72519C92C6@EXINFRCHMB1P.ccmc.local>
Message-ID: <1457105801.29173.4.camel@brian-rcg>

This probably belongs on  r-package-devel at r-project.org as it is not
about the development of R itself, but about package development.
-- 
Brian 

On Fri, 2016-03-04 at 14:44 +0000, Wang, Zhu wrote:
> Dear helpers,
> 
> I have multiple vignette files for a package, and I would like to have the "right" order of these files when displayed online. For instance, see below:
> 
> https://cran.r-project.org/web/packages/bst/index.html
> 
> The order of vignette links on CRAN is different from what I hoped for:
> 
> > vignette(package="bst")
> Vignettes in package 'bst':
> 
> pros                    Cancer Classification Using Mass
>                         Spectrometry-based Proteomics Data (source,
>                         pdf)
> static_khan             Classification of Cancer Types Using Gene
>                         Expression Data (Long) (source, pdf)
> khan                    Classification of Cancer Types Using Gene
>                         Expression Data (Short) (source, pdf)
> static_mcl              Classification of UCI Machine Learning Datasets
>                         (Long) (source, pdf)
> mcl                     Classification of UCI Machine Learning Datasets
>                         (Short) (source, pdf)
> 
> The package bst already has an index.html,  and I thought that should have done the job, but apparently not. Any suggestions?
> 
> Thanks,
> 
> Zhu
> 
> /bst/inst/doc/index.html
> <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd">
> <html xmlns="http://www.w3.org/1999/xhtml">
> <head><title>R: Vignettes and other documentation</title>
> <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
> <link rel="stylesheet" type="text/css" href="/doc/html/R.css" />
> </head><body>
> <h1> Vignettes and other documentation
> <img class="toplogo" src="/doc/html/logo.jpg" alt="[R logo]" />
> </h1>
> <hr/>
> <div style="text-align: center;">
> <a href="/doc/html/index.html"><img class="arrow" src="/doc/html/up.jpg" alt="[Top]" /></a>
> </div>
> <h2>Vignettes from package 'bst'</h2>
> <table width="100%">
> <col style="width: 22%;" />
> <col style="width:  2%;" />
> <col style="width: 50%;" />
> <col style="width:  8%;" />
> <col style="width:  8%;" />
> <col style="width:  8%;" />
> <tr><td style="text-align: right; vertical-align: top;"><a href="../../../library/bst/doc/pros.pdf">bst::pros</a></td>
> <td></td><td valign="top">Cancer Classification Using Mass Spectrometry-based Proteomics Data</td>
> <td valign="top"><a href="../../../library/bst/doc/pros.pdf">PDF</a></td>
> <td valign="top"><a href="../../../library/bst/doc/pros.Rnw">source</a></td>
> <td valign="top" style="white-space: nowrap"><a href="../../../library/bst/doc/pros.R">R code</a></td></tr>
> <tr><td style="text-align: right; vertical-align: top;"><a href="../../../library/bst/doc/static_khan.pdf">bst::static_khan</a></td>
> <td></td><td valign="top">Classification of Cancer Types Using Gene Expression Data (Long)</td>
> <td valign="top"><a href="../../../library/bst/doc/static_khan.pdf">PDF</a></td>
> <td valign="top"><a href="../../../library/bst/doc/static_khan.pdf.asis">source</a></td>
> <td valign="top" style="white-space: nowrap"></td></tr>
> <tr><td style="text-align: right; vertical-align: top;"><a href="../../../library/bst/doc/khan.pdf">bst::khan</a></td>
> <td></td><td valign="top">Classification of Cancer Types Using Gene Expression Data (Short)</td>
> <td valign="top"><a href="../../../library/bst/doc/khan.pdf">PDF</a></td>
> <td valign="top"><a href="../../../library/bst/doc/khan.Rnw">source</a></td>
> <td valign="top" style="white-space: nowrap"><a href="../../../library/bst/doc/khan.R">R code</a></td></tr>
> <tr><td style="text-align: right; vertical-align: top;"><a href="../../../library/bst/doc/static_mcl.pdf">bst::static_mcl</a></td>
> <td></td><td valign="top">Classification of UCI Machine Learning Datasets (Long)</td>
> <td valign="top"><a href="../../../library/bst/doc/static_mcl.pdf">PDF</a></td>
> <td valign="top"><a href="../../../library/bst/doc/static_mcl.pdf.asis">source</a></td>
> <td valign="top" style="white-space: nowrap"></td></tr>
> <tr><td style="text-align: right; vertical-align: top;"><a href="../../../library/bst/doc/mcl.pdf">bst::mcl</a></td>
> <td></td><td valign="top">Classification of UCI Machine Learning Datasets (Short)</td>
> <td valign="top"><a href="../../../library/bst/doc/mcl.pdf">PDF</a></td>
> <td valign="top"><a href="../../../library/bst/doc/mcl.Rnw">source</a></td>
> <td valign="top" style="white-space: nowrap"><a href="../../../library/bst/doc/mcl.R">R code</a></td></tr>
> </table>
> </body></html>
> ../../Rpkg/bst/inst/doc/index.html (END)
> 
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[Rd] vignette index
Brian G. Peterson