From ripley at stats.ox.ac.uk  Wed Nov  7 00:46:34 2007
From: ripley at stats.ox.ac.uk (Prof Brian Ripley)
Date: Tue, 6 Nov 2007 23:46:34 +0000 (GMT)
Subject: [Rd] R 2.6.0 make check fails on SGI origin 350 and
In-Reply-To: <42665B36-6FE2-48A4-A1C4-09F67D61A28C@ualberta.ca>
References: <42665B36-6FE2-48A4-A1C4-09F67D61A28C@ualberta.ca>
Message-ID: <Pine.LNX.4.64.0711062341250.30885@gannet.stats.ox.ac.uk>

We need to see the d-p-q-r-tests.Rout file, and perhaps ask for some more 
runs (unfortunately that line number is after massaging).  Can you make it 
available to us?  Or at least a portion containing the quoted line (which 
should only occur once)?

On Tue, 6 Nov 2007, kamil Marcinkowski wrote:

> Hello
>
> I am trying to install R 2.6.0 on a SGI Origin 350 running IRIX 6.5
> 6.5.28f
>
> R was configured with the following options:
>
>> --x-includes=/usr/include/X11
>> --x-libraries=/usr/lib/X11
>> --includedir=/usr/freeware/include
>> --includedir=/usr/freeware/lib32
>> --includedir=/usr/freeware/lib64
>> --with-readline=no
>> --with-iconv=no
>> CC=cc
>
>
> gmake complied successfully, however gmake check failed on d-p-q-r-
> tests.R .
>
>> running code in 'd-p-q-r-tests.R' ... OK
>> comparing 'd-p-q-r-tests.Rout' to './d-p-q-r-tests.Rout.save' ...
>> 959c959
>> < [1] "Mean scaled  difference: NaN"
>> ---
>>> [1] TRUE
>> gmake[3]: *** [d-p-q-r-tests.Rout] Error 1
>> gmake[3]: Leaving directory `/usr/global/R-build/R-2.6.0/tests'
>> gmake[2]: *** [test-Specific] Error 2
>> gmake[2]: Leaving directory `/usr/global/R-build/R-2.6.0/tests'
>> gmake[1]: *** [test-all-basics] Error 1
>> gmake[1]: Leaving directory `/usr/global/R-build/R-2.6.0/tests'
>> gmake: *** [check] Error 2
>
>
> Any ideas would be appreciated.
>
> Cheers,
>
> Kamil
>
> Kamil Marcinkowski                   Westgrid System Administrator
> kamil at ualberta.ca                     University of Alberta site
>  Tel.780 492-0354                     Research Computing Support
> Fax.780 492-1729                     Academic ICT
> Edmonton, Alberta, CANADA    University of Alberta
>
>
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-- 
Brian D. Ripley,                  ripley at stats.ox.ac.uk
Professor of Applied Statistics,  http://www.stats.ox.ac.uk/~ripley/
University of Oxford,             Tel:  +44 1865 272861 (self)
1 South Parks Road,                     +44 1865 272866 (PA)
Oxford OX1 3TG, UK                Fax:  +44 1865 272595



[Rd] R 2.6.0 make check fails on SGI origin 350 and
Prof Brian Ripley