From cbeleites at units.it  Tue Oct  5 11:45:22 2010
From: cbeleites at units.it (Claudia Beleites)
Date: Tue, 05 Oct 2010 11:45:22 +0200
Subject: [Rd] SweaveInput + keep.source = TRUE trouble
In-Reply-To: <4CAAF217.6090200@units.it>
References: <4CAAF217.6090200@units.it>
Message-ID: <4CAAF3B2.6020307@units.it>

Sorry, I forgot the sessionInfos:

devel:
R version 2.12.0 beta (2010-10-03 r53154)
Platform: x86_64-unknown-linux-gnu (64-bit)

locale:
  [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C
  [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8
  [5] LC_MONETARY=C              LC_MESSAGES=en_US.UTF-8
  [7] LC_PAPER=en_US.UTF-8       LC_NAME=C
  [9] LC_ADDRESS=C               LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base

2.11:
R version 2.11.1 (2010-05-31)
x86_64-pc-linux-gnu

locale:
  [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C
  [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8
  [5] LC_MONETARY=C              LC_MESSAGES=en_US.UTF-8
  [7] LC_PAPER=en_US.UTF-8       LC_NAME=C
  [9] LC_ADDRESS=C               LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base


Claudia Beleites wrote:
> Dear all,
> 
> I have trouble with R-beta sweaving files that include definitions with
> \SweaveInput in combination with keep.source = TRUE
> 
> Symptom:
> SInput is taken from too far down the input file (the shift is the 
> number of
> lines of the included file). Is that known? Searching didn't turn up 
> anything, yet I think there are more people than just me using keep.source.
> 
> Example:
> $ ~/tmp/R-beta/bin/R CMD Sweave baseline.Rnw &&
> mv baseline.tex baseline.devel.tex &&
> R CMD Sweave baseline.Rnw &&
> mv baseline.tex baseline.2.11.tex &&
> diff -u baseline.2.11.tex baseline.devel.tex
> 
> gives:
> --- baseline.2.11.tex    2010-10-05 11:33:49.000000000 +0200
> +++ baseline.devel.tex    2010-10-05 11:33:49.000000000 +0200
> @@ -83,7 +83,7 @@
>  \verb+\SweaveOpts{keep.source = TRUE}+
>  \begin{Schunk}
>  \begin{Sinput}
> -> 12
> +> line 54
>  \end{Sinput}
>  \begin{Soutput}
>  [1] 12
> @@ -106,7 +106,7 @@
>  line 63 chunk option keep.source = TRUE
>  \begin{Schunk}
>  \begin{Sinput}
> -> 14
> +> line 67
>  \end{Sinput}
>  \begin{Soutput}
>  [1] 14
> 
> I used yesterday's R-beta, and my system is Ubuntu 9.10 64 bit (though 
> that probably doesn't matter).
> 
> Building the example file I also found that \SweaveInput{} cannot be 
> followed by anything else on the line(not even a LaTeX comment).
> 
> \SweaveInput{x}y
> complains that file xy is not found.
> 
> Best regards,
> 
> Claudia Beleites
> 
> 
> ------------------------------------------------------------------------
> 
> ______________________________________________
> R-devel at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-devel


-- 
Claudia Beleites
Dipartimento dei Materiali e delle Risorse Naturali
Universit? degli Studi di Trieste
Via Alfonso Valerio 6/a
I-34127 Trieste

phone: +39 0 40 5 58-37 68
email: cbeleites at units.it



[Rd] SweaveInput + keep.source = TRUE trouble
Claudia Beleites