From michael.weylandt at gmail.com  Fri Sep 13 13:57:49 2013
From: michael.weylandt at gmail.com (R. Michael Weylandt <michael.weylandt@gmail.com>)
Date: Fri, 13 Sep 2013 07:57:49 -0400
Subject: [Rd] R CMD check fails in R-devel r63910
In-Reply-To: <1379072693241-4676046.post@n4.nabble.com>
References: <1379072693241-4676046.post@n4.nabble.com>
Message-ID: <865A3576-16BB-4CE3-A823-134CFDC72016@gmail.com>



On Sep 13, 2013, at 7:44, alku <alku at dtu.dk> wrote:

> Hi,
> 
> The R CMD check is successful in R 3.0.1 but fails to install package
> lmerTest under R-devel r63910, 
> Here is what I get:
> 
> ** preparing package for lazy loading
> Error in reconcilePropertiesAndPrototype(name, slots, prototype,
> superClasses,  : 
>  no definition was found for superclass "merMod" in the specification of
> class "merModLmerTest"

The line you point out below isn't relevant to this error: it's saying it can't find a definition of merMod and that it knows you meant to define one since it's part of merModLmerTest. 


> 
> In DESCRIPTION file I have:
> Depends:  Matrix, stats, methods, lme4
> Imports: numDeriv, MASS, Hmisc, gplots, pbkrtest
> 
> I have classes.R file where I specify that "merModLmerTest" class should
> inherit "merMod":
> 
> merModLmerTest <- setClass("merModLmerTest", contains = "merMod")

Which would be trouble if you don't define "merMod" elsewhere. 

M


> 
> But it seems like in R devel r63910 this line cannot be seen...
> 
> This error I have seen for a few days
> 
> Alexandra
> 
> 
> 
> --
> View this message in context: http://r.789695.n4.nabble.com/R-CMD-check-fails-in-R-devel-r63910-tp4676046.html
> Sent from the R devel mailing list archive at Nabble.com.
> 
> ______________________________________________
> R-devel at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-devel



[Rd] R CMD check fails in R-devel r63910
R. Michael Weylandt <michael.weylandt@gmail.com>