From kamil at ualberta.ca  Wed Nov  7 01:02:56 2007
From: kamil at ualberta.ca (kamil Marcinkowski)
Date: Tue, 6 Nov 2007 17:02:56 -0700
Subject: [Rd] R 2.6.0 make check fails on SGI origin 350 and
In-Reply-To: <Pine.LNX.4.64.0711062341250.30885@gannet.stats.ox.ac.uk>
References: <42665B36-6FE2-48A4-A1C4-09F67D61A28C@ualberta.ca>
	<Pine.LNX.4.64.0711062341250.30885@gannet.stats.ox.ac.uk>
Message-ID: <A8521DA1-CFA8-4B2D-896B-690AF301E122@ualberta.ca>

Hello Prof Brian Ripley and list

There is no "d-p-q-r-tests.Rout"  file, the following files do exists  
and are being sent as attachments:
./tests/d-p-q-r-tests.R ,  ./tests/d-p-q-r-tests.Rout.save , ./tests/d- 
p-q-r-tests.Rout.fail .






Cheers,

Kamil


Kamil Marcinkowski                   Westgrid System Administrator
kamil at ualberta.ca                     University of Alberta site
  Tel.780 492-0354                     Research Computing Support
Fax.780 492-1729                     Academic ICT
Edmonton, Alberta, CANADA    University of Alberta


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On 6-Nov-07, at 4:46 PM, Prof Brian Ripley wrote:

> We need to see the d-p-q-r-tests.Rout file, and perhaps ask for some  
> more runs (unfortunately that line number is after massaging).  Can  
> you make it available to us?  Or at least a portion containing the  
> quoted line (which should only occur once)?
>
> On Tue, 6 Nov 2007, kamil Marcinkowski wrote:
>
>> Hello
>>
>> I am trying to install R 2.6.0 on a SGI Origin 350 running IRIX 6.5
>> 6.5.28f
>>
>> R was configured with the following options:
>>
>>> --x-includes=/usr/include/X11
>>> --x-libraries=/usr/lib/X11
>>> --includedir=/usr/freeware/include
>>> --includedir=/usr/freeware/lib32
>>> --includedir=/usr/freeware/lib64
>>> --with-readline=no
>>> --with-iconv=no
>>> CC=cc
>>
>>
>> gmake complied successfully, however gmake check failed on d-p-q-r-
>> tests.R .
>>
>>> running code in 'd-p-q-r-tests.R' ... OK
>>> comparing 'd-p-q-r-tests.Rout' to './d-p-q-r-tests.Rout.save' ...
>>> 959c959
>>> < [1] "Mean scaled  difference: NaN"
>>> ---
>>>> [1] TRUE
>>> gmake[3]: *** [d-p-q-r-tests.Rout] Error 1
>>> gmake[3]: Leaving directory `/usr/global/R-build/R-2.6.0/tests'
>>> gmake[2]: *** [test-Specific] Error 2
>>> gmake[2]: Leaving directory `/usr/global/R-build/R-2.6.0/tests'
>>> gmake[1]: *** [test-all-basics] Error 1
>>> gmake[1]: Leaving directory `/usr/global/R-build/R-2.6.0/tests'
>>> gmake: *** [check] Error 2
>>
>>
>> Any ideas would be appreciated.
>>
>> Cheers,
>>
>> Kamil
>>
>> Kamil Marcinkowski                   Westgrid System Administrator
>> kamil at ualberta.ca                     University of Alberta site
>> Tel.780 492-0354                     Research Computing Support
>> Fax.780 492-1729                     Academic ICT
>> Edmonton, Alberta, CANADA    University of Alberta
>>
>>
>> "This communication is intended for the use of the recipient to which
>> it is
>> addressed, and may contain confidential, personal, and/or privileged
>> information.  Please contact us immediately if you are not the  
>> intended
>> recipient of this communication.  If you are not the intended
>> recipient of
>> this communication, do not copy, distribute, or take action on it.  
>> Any
>> communication received in error, or subsequent reply, should be
>> deleted or
>> destroyed."
>>
>>
>>
>>
>> 	[[alternative HTML version deleted]]
>>
>> ______________________________________________
>> R-devel at r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/r-devel
>>
>
> -- 
> Brian D. Ripley,                  ripley at stats.ox.ac.uk
> Professor of Applied Statistics,  http://www.stats.ox.ac.uk/~ripley/
> University of Oxford,             Tel:  +44 1865 272861 (self)
> 1 South Parks Road,                     +44 1865 272866 (PA)
> Oxford OX1 3TG, UK                Fax:  +44 1865 272595
>



[Rd] R 2.6.0 make check fails on SGI origin 350 and
kamil Marcinkowski