From ripley at stats.ox.ac.uk  Fri Nov  4 16:08:55 2005
From: ripley at stats.ox.ac.uk (Prof Brian Ripley)
Date: Fri, 4 Nov 2005 15:08:55 +0000 (GMT)
Subject: [Rd] Changes to environments in R-devel
In-Reply-To: <436AB18E.6080305@stats.uwo.ca>
References: <436AB18E.6080305@stats.uwo.ca>
Message-ID: <Pine.LNX.4.61.0511041443420.30492@gannet.stats>

As a followup, these changes have some impacts on already installed 
packages, most likely including all those using lazy-loading or saved 
images.

If you are building from a checked-out version of R you will need to 
trigger re-installation of the recommended packages.  Unix users can do 
that by

    rm src/library/Recommended/*.ts
    make

but Windows users will best do 'make distclean; make all recommended' as a 
clean is needed.

One way to re-install all other packages is

> have <- installed.packages(priority="NA")[,1]
> install.packages(have)

at least if you have them all in the main library tree or all in one 
additional tree.  Doing it from within R ensures that the dependency order 
is maintained.  If like me you have almost all CRAN packages installed 
that will take quite a while.

Note that re-installing binary packages under Windows and MacOS X will not 
be effective until the repositories have been rebuilt.

On Thu, 3 Nov 2005, Duncan Murdoch wrote:

> I've just committed some changes to R-devel which affect environments.
> Specifically:
>
>  - using NULL as an environment is now deprecated:  use baseenv()
> instead.  (baseenv() is already available in R 2.2.0, where it returns
> NULL.  For most purposes it retains the same meaning in R-devel.) If you
> do use NULL, it will be converted to baseenv(), and a warning printed.
> For example:
>
> > f <- function(x) 1
> > environment(f) <- NULL
> Warning message:
> use of NULL environment is deprecated
> > environment(f)
> <environment: base>
>
> There may be some places where I've missed putting the conversion in
> place, and use of NULL will cause an error; please let me know if you
> find any of those.  The intention is that NULL will be usable with
> warnings through to the end of the 2.3.x releases.
>
>  - baseenv() is no longer its own parent.  Its parent is an empty
> environment, available as emptyenv().
>
>  - You can now create your own environment with emptyenv() as its
> parent.  Searches for variables in such an environment will not
> automatically proceed to baseenv(), as searches do in current R releases.
>
> Duncan Murdoch
>
> ______________________________________________
> R-devel at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-devel
>
>

-- 
Brian D. Ripley,                  ripley at stats.ox.ac.uk
Professor of Applied Statistics,  http://www.stats.ox.ac.uk/~ripley/
University of Oxford,             Tel:  +44 1865 272861 (self)
1 South Parks Road,                     +44 1865 272866 (PA)
Oxford OX1 3TG, UK                Fax:  +44 1865 272595



[Rd] Changes to environments in R-devel
Prof Brian Ripley