From xie at yihui.name  Tue Jul  3 19:54:04 2012
From: xie at yihui.name (Yihui Xie)
Date: Tue, 3 Jul 2012 13:54:04 -0400
Subject: [Rd] Problem in vignette packaging of Sweave in utils package
In-Reply-To: <4FF32D10.2070803@gmail.com>
References: <CAErODj_9n7cjy5iPkjr-GOocL23hnJwX2QCYSd+4zJfgu0SUpA@mail.gmail.com>
	<4FF32D10.2070803@gmail.com>
Message-ID: <CANROs4e6mpBwbcmqCwGUPdfUJb1iriDw2Xq=DYsDrZu8R2Z_xw@mail.gmail.com>

Strange enough; I just noticed the HTML index pages of several base
packages were gone (e.g. base, stats, tools, utils) under Ubuntu. Not
sure if this is a problem of Debian packages or R itself.

> sessionInfo()
R version 2.15.1 (2012-06-22)
Platform: i686-pc-linux-gnu (32-bit)

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C
 [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8
 [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8
 [7] LC_PAPER=C                 LC_NAME=C
 [9] LC_ADDRESS=C               LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base

Regards,
Yihui
--
Yihui Xie <xieyihui at gmail.com>
Phone: 515-294-2465 Web: http://yihui.name
Department of Statistics, Iowa State University
2215 Snedecor Hall, Ames, IA


On Tue, Jul 3, 2012 at 1:34 PM, Duncan Murdoch <murdoch.duncan at gmail.com> wrote:
> On 03/07/2012 1:21 PM, Paul Johnson wrote:
>>
>> In ?Sweave, it refers to Sweave User Manual. In the doc folder of
>> utils package, I see "Sweave.pdf".
>>
>> However, I can't find it from within R
>>
>>
>> > vignette("Sweave User Manual")
>> Warning message:
>> vignette ?Sweave User Manual? not found
>>
>>
>> > browseVignettes("utils")
>> No vignettes found by browseVignettes("utils")
>>
>>
>> > library(help=utils)
>>
>> does not refer to any vignettes.
>>
>> The vignette does not appear in the main page for utils in help.start().
>>
>> I checked the source code for the Sweave vignette, but I don't see
>> anything wrong. It has all of the required elements:
>>
>> %\VignetteIndexEntry{Sweave User Manual}
>> %\VignettePackage{utils}
>> %\VignetteDepends{tools}
>> %\VignetteDepends{datasets}
>> %\VignetteDepends{stats}
>>
>> Am I accessing it incorrectly, or is there something wrong in my
>> install of R-2.15.1?
>
>
> The vignette name is "Sweave", so you should see it when you say
>
> vignette("Sweave")
>
> but you should also have seen it in
>
> browseVignettes("utils")
>
> and
>
> library(help=utils)
>
> and the page for utils in the HTML help.  So it looks as though something is
> wrong in your install.  I do see it in 2.15.1 patched on Windows.
>
> Duncan Murdoch
>
>
>>
>> > sessionInfo()
>> R version 2.15.1 (2012-06-22)
>> Platform: x86_64-pc-linux-gnu (64-bit)
>>
>> locale:
>>   [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C
>>   [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8
>>   [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8
>>   [7] LC_PAPER=C                 LC_NAME=C
>>   [9] LC_ADDRESS=C               LC_TELEPHONE=C
>> [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
>>
>> attached base packages:
>> [1] stats     graphics  grDevices utils     datasets  methods   base
>>
>> loaded via a namespace (and not attached):
>> [1] tools_2.15.1
>
>
> ______________________________________________
> R-devel at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-devel



[Rd] Problem in vignette packaging of Sweave in utils package
Yihui Xie