From Guillermo.Vinue at uv.es  Fri Feb 21 10:22:53 2014
From: Guillermo.Vinue at uv.es (Guillermo.Vinue at uv.es)
Date: Fri, 21 Feb 2014 10:22:53 +0100 (CET)
Subject: [Rd] Where to put package vignettes
In-Reply-To: <CANROs4fS34nwBCjPU+ay_YS=2whN3emA5Msn-p1HSVWsje2RYw@mail.gmail.com>
References: <CANROs4fS34nwBCjPU+ay_YS=2whN3emA5Msn-p1HSVWsje2RYw@mail.gmail.com>
Message-ID: <5355289375vivigui@uv.es>

Dear All,

As you mentioned, it was a matter of upgrading R. Now I have R 3.0.2 and
everything has worked well.

Thank you very much for all your comments and suggestions. They have
been very helpful.

Best regards,

Guillermo

> It is not guaranteed that knitr vignettes will work for R < 3.0.x
> (even with the Makefile approach, which was really a hack). Unless you
> must stay with R 2.15.x, you are strongly recommended to upgrade to R
> 3.0.x and forget about the Makefile approach. Then follow the three
> steps mentioned in http://yihui.name/knitr/demo/vignette/
> 
> If you still cannot work it out, please point us to the source of your
package.
> 
> Regards,
> Yihui
> --
> Yihui Xie <xieyihui at gmail.com>
> Web: http://yihui.name
> 
> 
> On Thu, Feb 20, 2014 at 8:43 AM,  <Guillermo.Vinue at uv.es> wrote:
> > Dear S?ren,
> >
> > Thank you very much for your answer, it solved my problem and now my
> > package can be installed both on Linux and Windows and the vignette is
> > available in both systems. I put the vignette in /vignettes.
> >
> > However, unfortunately my problems have not ended here. As mentioned, my
> > vignette is built with knitr and with the following commands:
> >
> > 1) R CMD check foo
> > 2) R CMD build foo
> > 3) R CMD INSTALL foo_xxx.tar.gz
> >
> > the vignette is built with Sweave!
> >
> > I have read in http://yihui.name/knitr/demo/vignette/ that in that case,
> > a Makefile should be incorporated.
> >
> > I have incorporated in /inst/doc the makefile from
> > https://github.com/yihui/knitr/blob/7eb34104/inst/doc/Makefile
> >
> > however, my vignette is still built with Sweave. I use R 2.15.2.
> >
> > How can I fix this performance?.
> >
> > Thank you very much again.
> >
> > Best regards,
> >
> > Guillermo
> >
> >> My understanding is this:
> >>
> >> 1) Put vignettes files (.Rnw files) in the /vignettes subdirectory. 2)
> > Build the package foo with R CMD build foo. 3) Install the package with
> > R CMD INSTALL foo_xxx.tar.gz
> >>
> >> Then the vignettes will be available. However you can also install the
> > package with R CMD INSTALL foo, but then the vignettes will *not* be
> > available (because it is in the build process that the vignettes go from
> > /vignettes to /inst/doc)
> >>
> >> Regards
> >> S?ren
> >>
> >>
> >> -----Original Message-----
> >> From: r-devel-bounces at r-project.org
> > [mailto:r-devel-bounces at r-project.org] On Behalf Of
Guillermo.Vinue at uv.es
> >> Sent: 20. februar 2014 12:19
> >> To: r-devel at r-project.org
> >> Subject: [Rd] Where to put package vignettes
> >>
> >> Dear R-devel list,
> >>
> >> My name is Guillermo Vinu?. I have created an R package that includes
> > a vignette. Earlier on, to test my package, I tried to install it both
> > in Linux and Windows and it worked. My vignette was in /inst/doc.
> >>
> >> Now, I have finished for good and before submitting my package to CRAN
> > I've tried to install it again first in Linux and then in Windows (I
> > removed that first installation some time ago).
> >>
> >> My package was succesfully installed in Linux (Fedora 18 and R 2.15.2)
> > and the vignette was available. However, when trying to install it in
> > Windows (R 3.0.2), unfortunately the vignette didn't appear. My vignette
> > is build with knitr.
> >>
> >> In fact, if I first install the package on Windows, the vignette is
> > accesible, but then in Linux, not.
> >>
> >> I have read that as from R 2.14.0 the preferred location for the
> > Sweave sources is the subdirectory vignettes of the source packages, but
> > for compatibility with earlier versions of R, vignette sources will be
> > looked for in inst/doc if vignettes does not exist.
> >>
> >> Where do I have to put my vignette so that it could be available with
> > any installation and which files (.Rnw or .pdf) should be included?.
> >>
> >> I hope you can clarify my doubts. I have seen the collection of prior
> > postings to the list, but I have not found a specifical answer to my
> > doubts .
> >>
> >> Thank you very much in advance.
> >>
> >> Best regards,
> >>
> >> Guillermo
> 
> 



[Rd] Where to put package vignettes
Guillermo.Vinue at uv.es