From p.dalgaard@biostat.ku.dk  Mon Oct 14 15:22:05 2002
From: p.dalgaard@biostat.ku.dk (Peter Dalgaard BSA)
Date: 14 Oct 2002 16:22:05 +0200
Subject: possible memory leak in 1.6 (PR#2160)
In-Reply-To: <200210141401.QAA11994@pubhealth.ku.dk>
References: <200210141401.QAA11994@pubhealth.ku.dk>
Message-ID: <x2y9912j8y.fsf@biostat.ku.dk>

socher@stat.uni-muenchen.de writes:

> Full_Name: Anne-Laure Boulesteix
> Version: 1.6.0
> OS: Linux
> Submission from: (NULL) (141.84.161.156)
> 
> 
> Hi,
> 
> I noticed the following problem with 1.6.0 (which was not present in 1.5.1): 
> 
> I work with very large datasets and encountered a problem with memory
> allocation,
> (probably a memory leak).  I wrote a programm with a loop.  In this loop in
> each
> iteration I create a  very large matrix and assign it to a variable which
> is the SAME for all the iterations.  So at each round the new matrix overwrites
> the old  matrix.  In 1.5.1  the garbage collector seems to clean up the old
> unused memory.  Unfortunately, in 1.6.0 with each round the memory used by R
> increases until the R process is killed. 
> 
> Is there any way around this?

Example code that would allow someone to reproduce and hunt down the
problem would help. This could be the same issue that Achim Zeileis
reported a few days ago. In that case the current source snapshots may
have it fixed.

Please be specific when you report problems. A broad outline of your
program is not sufficient to let us guess where the problem lies.
We could write a minimal loop which fits your description, but so
could you, and you're much closer to telling whether it is actually
displaying the same problem.

-- 
   O__  ---- Peter Dalgaard             Blegdamsvej 3  
  c/ /'_ --- Dept. of Biostatistics     2200 Cph. N   
 (*) \(*) -- University of Copenhagen   Denmark      Ph: (+45) 35327918
~~~~~~~~~~ - (p.dalgaard@biostat.ku.dk)             FAX: (+45) 35327907
-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-
r-devel mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html
Send "info", "help", or "[un]subscribe"
(in the "body", not the subject !)  To: r-devel-request@stat.math.ethz.ch
_._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._._


possible memory leak in 1.6 (PR#2160)
Peter Dalgaard BSA