From watplatt at us.ibm.com  Fri Oct 13 21:43:13 2006
From: watplatt at us.ibm.com (watplatt at us.ibm.com)
Date: Fri, 13 Oct 2006 21:43:13 +0200 (CEST)
Subject: [Rd] Unable to build (PR#9295)
Message-ID: <20061013194313.2A2FD4C89A@slim.kubism.ku.dk>

Full_Name: Daniel E. Platt
Version: 2.4.0
OS: AIX 5.3
Submission from: (NULL) (129.34.20.23)


Did a new build of gcc c,c++,gfortran v4.1.1, (re)built R 2.3.1 using
config.site as spec'd in R-admin.pdf in sec C.9 as described by Jagat Sheth,
with addition of FC=gfortran (configure tried using f95, which is present on the
system, but won't bind with gcc's obj files).

Applying the same to 4.1.1 produces the following:

make[4]: Leaving directory `/geno4/watplatt/R/R-2.4.0/src/library/tools/src'
Error in dyn.load(x, as.logical(local), as.logical(now)) : 
        unable to load shared library
'/geno4/watplatt/R/R-2.4.0/library/tools/libs/tools.so':
  rtld: 0712-001 Symbol TYPEOF was referenced
      from module /geno4/watplatt/R/R-2.4.0/library/tools/libs/tools.so(), but a
runtime definition
      of the symbol was not found.
rtld: 0712-001 Symbol Rf_error was referenced
      from module /geno4/watplatt/R/R-2.4.0/library/tools/libs/tools.so(), but a
runtime definition
      of the symbol was not found.
rtld: 0712-001 Symbol Rf_asLogical was referenced
      from module /geno4/watplatt/R/R-2.4.0/library/tools/libs/tools.so(), but a
runtime definition
      of the symbol was not found.
rtld: 0712-001 Symbol LENGTH was referenced
      from module /geno4/watplatt/R/R-2.4.0/library/tools/libs/tools.so(), but a
runtime definition
      of the symbol was not found.
rtld: 0712-001 Symbol STRING_ELT was referenced
      from module /geno4/watplatt/R/R-2.4.0/library/tools/libs/tools.so(), bu
Execution halted
make[3]: *** [all] Error 1
make[3]: Leaving directory `/geno4/watplatt/R/R-2.4.0/src/library/tools'
make[2]: *** [R] Error 1
make[2]: Leaving directory `/geno4/watplatt/R/R-2.4.0/src/library'
make[1]: *** [R] Error 1
make[1]: Leaving directory `/geno4/watplatt/R/R-2.4.0/src'
make: *** [R] Error 1

Are there undefined #define's leaking in as code?

Dan




[Rd] Unable to build (PR#9295)
watplatt at us.ibm.com