From sfalcon at fhcrc.org  Wed Aug 29 06:48:10 2007
From: sfalcon at fhcrc.org (Seth Falcon)
Date: Tue, 28 Aug 2007 21:48:10 -0700
Subject: [Rd] R CMD check: Error in function (env) : could not find
	function "finalize"
In-Reply-To: <59d7961d0708281324q11f966d2y724c0bdb0a98e036@mail.gmail.com>
	(Henrik Bengtsson's message of "Tue\,
	28 Aug 2007 13\:24\:48 -0700")
References: <59d7961d0708281324q11f966d2y724c0bdb0a98e036@mail.gmail.com>
Message-ID: <m2lkbv0wvp.fsf@ziti.fhcrc.org>

Hi Henrik,

"Henrik Bengtsson" <hb at stat.berkeley.edu> writes:

> Hi,
>
> does someone else get this error message:
>
> Error in function (env)  : could not find function "finalize"?
>
> I get an error when running examples in R CMD check (v2.6.0; session
> info below):
[snip]
> The error occurs in R CMD check but also when start a fresh R session
> and run, in this case, affxparser.Rcheck/affxparser-Ex.R.  It always
> occur on the same line.

So does options(error=recover) help in determining where the error is
coming from?

If you can narrow it down, gctorture may help or running the examples
under valgrind.

+ seth

-- 
Seth Falcon | Computational Biology | Fred Hutchinson Cancer Research Center
BioC: http://bioconductor.org/
Blog: http://userprimary.net/user/



[Rd] R CMD check: Error in function (env) : could not find function "finalize"
Seth Falcon