From henr|k@bengt@@on @end|ng |rom gm@||@com  Sat Jun 29 21:09:28 2019
From: henr|k@bengt@@on @end|ng |rom gm@||@com (Henrik Bengtsson)
Date: Sat, 29 Jun 2019 12:09:28 -0700
Subject: [Rd] R-Forge > GitHub?
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On Sat, Jun 29, 2019 at 9:43 AM Spencer Graves
<spencer.graves at prodsyse.com> wrote:
>
> Hi, Ott et al.:
>
>
>        What's the best way to get "Travis CI" to build and test the two
> packages, Ecdat and Ecfun, that have long been combined in the Ecdat
> project?
>
>
>        Following Ott's advice and studying studying Wickham's "R
> Packages" (http://r-pkgs.had.co.nz/), I was able to configure RStudio so
> it would sync using git with "GitHub.com/sbgraves237/Ecdat".  However,
> when I tried to configure "Travis CI", it said, "No DESCRIPTION file
> found, user must supply their own install and script steps".
>
>
>        Earlier in this thread, I think someone suggested I make the
> Ecdat and Ecfun packages separate projects on GitHub (though I can't
> find that suggestion now).  This would not be an issue if it were all
> local without version control.  With RStudio managing my interface with
> GitHub, it now seems quite tricky.

I'm 99.999% confident that your life will be much much easier if you
keep one R package per repository.  If you don't, you'll probably be
very lonely when it comes to tools etc.  There are built-in 'git'
commands, but also git utility tools, for extracting a subset of
folders/files from git repository into new git repositories.  You'll
still preserve the commit history.  I would deal with this in the
terminal, using the 'git' client and possible some extraction tool.

Also, while you spend time on this, have a look at the commit
authorship that I mentioned previously.  It's nice to have that in
place later.

After you got the above in place, then .travis.yml and appveyor.yml is
pretty straightforward (might even be a copy'n'paste).

Finally, I saw you put your credentials in the URL when you cloned.  I
don't think that's safe, your GitHub credentials will be stored in the
./.git/config file.  Instead, just clone with:

git clone https://github.com/sbgraves237/Ecdat.git

You can then configure git to cache your HTTPS credentials for a
certain time, e.g. 120 minutes, so you don't have to enter them each
time you pull/push.  See https://git-scm.com/docs/git-credential-cache
for details.  That's what I tell new-comers to Git(Hub|Lab|...) to
use.  Personally, I add my public SSH key to GitHub and then clone
with the ssh protocol:

git clone git at github.com:sbgraves237/Ecdat.git

That way my I never have to worry entering my credentials.

/Henrik

>
>
>        Suggestions?
>        Thanks again to all who have offered suggestions so far.  This
> migration from R-Forge to GitHub seems complete except for the automatic
> tests provided via "Travis CI".
>
>
>        Spencer
>
>
> On 2019-06-28 22:25, Ott Toomet wrote:
> > Apparently your username/password are wrong.  Can you clone/push from
> > other repos?
> >
> > You do not need authorization when cloning a public repo, so even
> > incorrect credentials may work (haven't tested this though).  But for
> > push you have to have that in order.
> >
> > I suggest you create ssh keys, upload those to GH, and use ssh
> > authorization instead of https.
> >
> > Cheers,
> > Ott
> >
> > On Fri, Jun 28, 2019 at 8:18 PM Spencer Graves
> > <spencer.graves at prodsyse.com <mailto:spencer.graves at prodsyse.com>> wrote:
> >
> >     Thanks to Duncan, Henrik and Henrik, Brian, and G?bor:
> >
> >
> >            I created a local copy of the new GitHub version using the
> >     following:
> >
> >     git clone
> >     https://sbgraves237:mypassword at github.com/sbgraves237/Ecdat.git
> >
> >
> >
> >            That worked in the sense that I got a local copy. However,
> >     after
> >     I rolled the version number and did "git commit" on the DESCRIPTION
> >     files, my "git push" command generated the following:
> >
> >
> >     remote: Invalid username or password.
> >     fatal: Authentication failed for
> >     'https://sbgraves237:mypassword at github.com/sbgraves237/Ecdat.git/'
> >
> >
> >            What am I missing?  [Note:  I used my actual GitHub
> >     password in
> >     place of "mypassword" here, and this "Authentication failed" message
> >     reported the GitHub password I used here.]
> >
> >
> >            Thanks,
> >            Spencer
> >
> >
> >     p.s.  I'm doing this under macOS Mojave 10.14.5.  Also,  I added
> >     ".onAttach" functions to the R-Forge versions as Brian G. Peterson
> >     suggested.  That seemed to work fine.
> >
> >
> >     On 2019-06-28 07:13, Duncan Murdoch wrote:
> >     > On 28/06/2019 6:26 a.m., G?bor Cs?rdi wrote:
> >     >
> >     >> Instead, you can do as Duncan suggested, and put a README in your
> >     >> R-Forge
> >     >> repository, that points to *your* GitHub repositor(y/ies). Then the
> >     >> https://github.com/rforge/ecdat read only mirror will pick this up
> >     >> and will
> >     >> point there as well.
> >     >
> >     > Just for the record:  that was Henrik Singmann's suggestion, I just
> >     > agreed with it.
> >     >
> >     > Duncan Murdoch
> >     >
> >
> >
> >             [[alternative HTML version deleted]]
> >
> >     ______________________________________________
> >     R-devel at r-project.org <mailto:R-devel at r-project.org> mailing list
> >     https://stat.ethz.ch/mailman/listinfo/r-devel
> >
>
>
>         [[alternative HTML version deleted]]
>
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[Rd] R-Forge > GitHub?
Henrik Bengtsson