From ripley at stats.ox.ac.uk  Thu Nov 15 08:22:09 2007
From: ripley at stats.ox.ac.uk (Prof Brian Ripley)
Date: Thu, 15 Nov 2007 07:22:09 +0000 (GMT)
Subject: [Rd] library path in Rd link
In-Reply-To: <200711150144.33561.dusa.adrian@gmail.com>
References: <200711141549.54176.dusa.adrian@gmail.com>
	<200711150109.02826.dusa.adrian@gmail.com>
	<Pine.LNX.4.64.0711142309470.1433@gannet.stats.ox.ac.uk>
	<200711150144.33561.dusa.adrian@gmail.com>
Message-ID: <Pine.LNX.4.64.0711150658040.11152@gannet.stats.ox.ac.uk>

On Thu, 15 Nov 2007, Adrian Dusa wrote:

> On Thursday 15 November 2007, Prof Brian Ripley wrote:
>> [...]
>>>
>>> Using as above:
>>> \code{\link{anova}}
>>>
>>> the html help file directs to
>>> file:///home/adi/myRlibrary/stats/html/anova.html
>>
>> I hope it is actually ../../stats/html/anova.html and the browser is
>> interpreting that as a full URL.
>>
>>> instead of
>>> file:///usr/lib/R/library/stats/html/anova.html
>>
>> But at run time help.start() creates links into a subdirectory of
>> tempdir().  As in
>>
>>> help.start()
>
> I got it.
> Perhaps it would be useful to have another startup option, something like:
> options(htmlLinksResolve=TRUE)
>
> that one could use in the .First() function from .Rprofile

You could have a function to run there, essentially (from help.start())

     .Script("sh", "help-links.sh",
             paste(tempdir(), paste(.libPaths(), collapse = " ")))

and perhaps (it is a lot slower)

     utils::make.packages.html()

The problem is that even the first can be slow on a network-mounted file 
system with a lot of packages installed, do we don't want to do it by 
default.

> I tried using help.start() in .Rprofile, but it throws a (probably obvious)
> error:
> Error: could not find function "help.start"

Duncan has answered that.

> For my personal purposes, all questions have been answered though.
> Thank you very much,
> Adrian
>
>
>

-- 
Brian D. Ripley,                  ripley at stats.ox.ac.uk
Professor of Applied Statistics,  http://www.stats.ox.ac.uk/~ripley/
University of Oxford,             Tel:  +44 1865 272861 (self)
1 South Parks Road,                     +44 1865 272866 (PA)
Oxford OX1 3TG, UK                Fax:  +44 1865 272595



[Rd] library path in Rd link
Prof Brian Ripley