From bbolker at gmail.com  Wed Sep 17 18:56:28 2014
From: bbolker at gmail.com (Ben Bolker)
Date: Wed, 17 Sep 2014 12:56:28 -0400
Subject: [Rd] issue with compiling r6
In-Reply-To: <DF610537-0A50-4CE5-9739-2AA91F47CF2A@gmail.com>
References: <5419A306.2070009@mcmaster.ca>
	<DF610537-0A50-4CE5-9739-2AA91F47CF2A@gmail.com>
Message-ID: <5419BD3C.80205@gmail.com>

  Thanks for the information.  It's the old story -- it's only once you
finally convince yourself that the problems are always on your end and
never bugs in the other guy's (development) code that you actually
encounter bugs in the other guy's code.

  Ben Bolker

On 14-09-17 11:32 AM, peter dalgaard wrote:
> 
> On 17 Sep 2014, at 17:04 , Ben Bolker <bbolker at gmail.com> wrote:
> 
> I am painfully aware that this is most likely a problem with my 
> system, but I am nevertheless going to ask if anyone has any 
> ideas/suggestions for diagnosis and trouble-shooting.
> 
> 
>> Others have been seeing this since r66622, so I think you're just
>> suffering the "unsuffered consequences" (unsuffered by regular
>> users, that is; people who run development versions will suffer
>> occasionally). Just hang on for a while.
> 
> - From a clean checkout of release 66624 on Ubuntu 12.04 (32-bit,
> sorry!):
> 
>> That's _revision_ 66624, please. It is only "released" in the sense
>> that it isn't kept secret.
> 
>> -pd
> 
> gcc (Ubuntu/Linaro 4.6.4-1ubuntu1~12.04) 4.6.4
> 
> svn checkout https://svn.r-project.org/R/trunk/ 
> tools/rsync-recommended
> 
> cd ../r-build ../r-devel/configure
> 
> R is now configured for i686-pc-linux-gnu
> 
> Source directory:          ../r-devel Installation directory:
> /usr/local
> 
> C compiler:                gcc -std=gnu99  -g -O2 Fortran 77
> compiler:       gfortran  -g -O2
> 
> C++ compiler:              g++  -g -O2 C++ 11 compiler:           g++
> -std=c++0x -g -O2 Fortran 90/95 compiler:    gfortran -g -O2 Obj-C
> compiler:
> 
> Interfaces supported:      X11, tcltk External libraries:
> readline, lzma Additional capabilities:   PNG, JPEG, TIFF, NLS,
> cairo Options enabled:           shared BLAS, R profiling
> 
> Capabilities skipped:      ICU Options not enabled:       memory
> profiling
> 
> make fails at:
> 
> byte-compiling 'methods' initializing class and method definitions
> ...Error: .onLoad failed in loadNamespace() for 'methods', details: 
> call: new("classRepresentation") error: could not find function
> "isVirtualClass"
> 
> The only other oddity of my system/potential clue is that symbolic 
> links sometimes behave strangely because I am working on a
> VirtualBox virtual machine with a virtual Linux filesystem layered
> over an HGFS filesystem.
>> 
>> ______________________________________________ 
>> R-devel at r-project.org mailing list 
>> https://stat.ethz.ch/mailman/listinfo/r-devel
>



[Rd] issue with compiling r6
Ben Bolker