From toffolidan at yahoo.com.br  Wed May  7 19:15:32 2008
From: toffolidan at yahoo.com.br (toffolidan at yahoo.com.br)
Date: Wed,  7 May 2008 19:15:32 +0200 (CEST)
Subject: [Rd] bug on compilation (PR#11395)
Message-ID: <20080507171532.19EEC282EFF8@mail.pubhealth.ku.dk>

Dear Mr.

Beginning to work on Linux.

I am trying to install R into Ubuntu Gustsy. I installed version 2.5.1 and worked fine. But then I tried to upgrade by adding these lines to sources.list:

deb http://cran.fiocruz.br/bin/linux/debian etch-cran/
deb http://cran.fiocruz.br/bin/linux/ubuntu gutsy/

I introduced the authorization keys (as recommended) and the files were downloaded. But then I tried to upgrade but some have problems on dependencies. What I did was to erase R folder installed on my /usr/lib and went to synaptic and uninstall all the cran files. The idea was to start over again.

But I try to install by apt and appears:

Os pacotes a seguir t?m depend?ncias desencontradas:
  r-base: Depende: r-base-core (>= 2.7.0-1gutsy0) mas 2.5.1-1 est? para ser instalado
  r-recommended: Depende: r-base-core (>= 2.7.0-1gutsy0) mas 2.5.1-1 est? para ser instalado
                 Depende: r-cran-boot (>= 1.2.19) mas n?o vai ser instalado
                 Depende: r-cran-cluster (>= 1.9.6-2) mas n?o vai ser instalado
                 Depende: r-cran-foreign (>= 0.7-2) mas n?o vai ser instalado
                 Depende: r-cran-kernsmooth (>= 2.2.14) mas n?o vai ser instalado
                 Depende: r-cran-lattice (>= 0.10.11) mas n?o vai ser instalado
                 Depende: r-cran-mgcv (>= 1.1.5) mas n?o vai ser instalado
                 Depende: r-cran-nlme (>= 3.1.52) mas n?o vai ser instalado
                 Depende: r-cran-rpart (>= 3.1.20) mas n?o vai ser instalado
                 Depende: r-cran-survival (>= 2.13.2-1) mas n?o vai ser instalado
                 Depende: r-cran-vr (>= 7.2.8) mas n?o vai ser instalado
                 Depende: r-cran-codetools mas n?o vai ser instalado
E: Pacotes quebrados

I dowloaded the R-2.7.0 and tried to compile with the command ./configure. But  what appeared at the end was (after a bunch of other things):

configure: error: --with-readline=yes (default) and headers/libs are not available

What should I do?

Hope you can help me.

Sincerelly

Daniel





---------------------------------


Daniel Toffoli Ribeiro
Laborat?rio de Evolu??o e Gen?tica Animal
Universidade Federal do Amazonas
www.evoamazon.net

tel: ++55 (92) 36474233

       
---------------------------------

	[[alternative HTML version deleted]]



[Rd] bug on compilation (PR#11395)
toffolidan at yahoo.com.br