From skyebend at skyeome.net  Wed Oct 23 11:33:40 2013
From: skyebend at skyeome.net (Skye Bender-deMoll)
Date: Wed, 23 Oct 2013 02:33:40 -0700
Subject: [Rd] possible Sweave problem in rdevel build on Debian 6.0.8?
In-Reply-To: <FAE36E98-BD3A-4ACF-B32D-AC2108017A6E@gmail.com>
References: <5266CE1A.90200@skyeome.net> <52678917.7060607@stats.ox.ac.uk>
	<FAE36E98-BD3A-4ACF-B32D-AC2108017A6E@gmail.com>
Message-ID: <526797F4.3010003@skyeome.net>

That fixed it for me,  r64100 is building cleanly again.

thanks!
  -skye

On 10/23/2013 01:37 AM, peter dalgaard wrote:
> Affirmative. I was seeing this in 64099, but it disappeared with 64101. (OSX Lion if it matters to anyone)
>
> -pd
>
> On Oct 23, 2013, at 10:30 , Prof Brian Ripley wrote:
>
>> Please try again: I could reproduce this on one system prior to r64100.
>>
>> On 22/10/2013 20:12, Skye Bender-deMoll wrote:
>>> Dear R-Devel,
>>>
>>> Note:  I posted a similar message to R-sig-debian yesterday because I
>>> assumed it was a Debian issue, received response that it it may be more
>>> appropriate for r-devel since it involves building from the svn version.
>>>
>>> As of Oct 21, we are running into a build failure when trying to
>>> compile the development version of R from the svn repository.  The
>>> problem still persists as of Revision:64096:
>>>
>>> We are running:
>>>
>>> ./configure && make -j4 distclean && ./configure && make -j4
>>>
>>> [lots of normal compile output not shown...]
>>>
>>> building/updating vignettes for package 'utils' ...
>>> processing 'Sweave.Rnw'
>>> Error: running Sweave on vignette
>>> '/net/home/rpackagebuilder/src/R.trunk/src/library/utils/vignettes/Sweave.Rnw'
>>>
>>>
>>> failed with message:
>>> <text>:1:1: unexpected '|'
>>> 1: |
>>>        ^
>>> Execution halted
>>> make[1]: *** [vignettes-lattice] Error 1
>>> make[1]: Leaving directory
>>> `/net/home/rpackagebuilder/src/R.trunk/src/library'
>>> make: *** [vignettes] Error 2
>>>
>>>
>>> The same vignette compiles without error on the same machine using the
>>> stable release version of R (which we also build from source with same
>>> commands).
>>>
>>> Dirk reported yesterday that he was unable to reproduce the problem on
>>> r-devel svn "..Using Ubuntu 13.04, current"
>>>
>>> Does anyone have suggestions on how I might debug this further to
>>> determine if this is an issue with Sweave, or something with our system
>>> configuration which would impact one build and not the other?  When I
>>> diff the files in utils I see quite a few changes to Sweave between the
>>> stable and devel branches, but I'm not sure how to interpret them.
>>>
>>> thanks for your help,
>>>     -skye
>>>
>>> ______________________________________________
>>> R-devel at r-project.org mailing list
>>> https://stat.ethz.ch/mailman/listinfo/r-devel
>>
>>
>> --
>> Brian D. Ripley,                  ripley at stats.ox.ac.uk
>> Professor of Applied Statistics,  http://www.stats.ox.ac.uk/~ripley/
>> University of Oxford,             Tel:  +44 1865 272861 (self)
>> 1 South Parks Road,                     +44 1865 272866 (PA)
>> Oxford OX1 3TG, UK                Fax:  +44 1865 272595
>>
>> ______________________________________________
>> R-devel at r-project.org mailing list
>> https://stat.ethz.ch/mailman/listinfo/r-devel
>



[Rd] possible Sweave problem in rdevel build on Debian 6.0.8?
Skye Bender-deMoll