From sebastiendurand at videotron.ca  Thu Aug  4 19:42:07 2005
From: sebastiendurand at videotron.ca (=?ISO-8859-1?Q?S=E9bastien_Durand?=)
Date: Thu, 4 Aug 2005 13:42:07 -0400
Subject: [Rd] call fortran in R
In-Reply-To: <77DED4C1-017A-4A60-8B81-0E991C97E020@UMontreal.CA>
References: <BB026B1E-17AE-42A2-B86E-6C74337202D1@UMontreal.CA>
	<834774B3-26D3-4600-9B48-DF6626F8FAC6@frazmtn.com>
	<77DED4C1-017A-4A60-8B81-0E991C97E020@UMontreal.CA>
Message-ID: <FA2C6D13-A635-44BC-88D8-A0B9E93705DA@videotron.ca>

Forget that last reply!

I found how to set the environment!

Le 05-08-04 ? 13:38, S?bastien Durand a ?crit :

> Ok,  I am presently updating my system.
>
> How do you set
>       setenv gcc /usr/local/bin/gfortran.
>
> Using bash.
>
> Then I will the command to compile the foo.f file been the same!
>
> I guess so
>
> S.
>
>>
>> also gcc 4061 is a bit old -- the tiger update in 10.4.2 was
>> 50xx, i think, cvs is up to apple build 5217 and is now
>> gcc-4.0.1.
>>
>> -- jan
>>
>> On Aug 4, 2005, at 8:25 , S?bastien Durand wrote:
>>
>>
>>
>>> Dear all,
>>>
>>> Since the command you ask me to type doesn't show anything
>>> Here some more information, on my system and on the foo.so
>>> compiled file
>>>
>>> I am using g77 version 3.4.4  Configured with: ../gcc/configure --
>>> enable-threads=posix --enable-languages=f77
>>>
>>> I am using gcc version 4.0.0 20041026 (Apple Computer, Inc. build
>>> 4061)
>>>          Configured with: /private/var/tmp/gcc/gcc-4061.obj~8/src/
>>> configure --disable-checking --prefix=/usr --mandir=/share/man --
>>> enable-languages=c,objc,c++,obj-c++ --program-transform-name=/^ 
>>> [cg][^
>>> +.-]*$/s/$/-4.0/
>>>          --with-gxx-include-dir=/include/gcc/darwin/4.0/c++ --
>>> build=powerpc-apple-darwin8 --host=powerpc-apple-darwin8 --
>>> target=powerpc-apple-darwin8
>>>
>>> I don't know if this can be of any help to you but there is again  
>>> how
>>> I compile the foo.f
>>>
>>> Double-G5:~ sebas$ R CMD SHLIB  ~/Desktop/Fortan_kmeans/kmeans3.f
>>>          g77   -fno-common  -g -O2 -c /Users/sebas/Desktop/
>>> Fortan_kmeans/kmeans3.f -o /Users/sebas/Desktop/Fortan_kmeans/
>>> kmeans3.o
>>>          gcc-3.3 -bundle -flat_namespace -undefined suppress -L/usr/
>>> local/lib -o /Users/sebas/Desktop/Fortan_kmeans/kmeans3.so /Users/
>>> sebas/Desktop/Fortan_kmeans/kmeans3.o  -L/usr/local/lib/gcc/powerpc-
>>> apple-darwin6.8/3.4.2 -lg2c -lSystem -framework R
>>>
>>>
>>> There is all the info about the foo.so file using nm -a option
>>> instead of -g:
>>>
>>>
>>> Double-G5:~ sebas$ nm -a ~/Desktop/Fortan_kmeans/kmeans3.so
>>> 00000fe4 - 01 0114 SLINE
>>> 00000fb0 - 01 0000    SO
>>> 00000fd8 - 01 010d SLINE
>>> 00000fdc - 01 010e SLINE
>>> 00000fe0 - 01 010f SLINE
>>> 00000fec - 01 0116 SLINE
>>> 00000fe8 - 01 0115 SLINE
>>> 00001000 - 01 0000    SO
>>> 00001000 - 01 011b SLINE
>>> 00000ffc - 01 011a SLINE
>>> 00000ff8 - 01 0119 SLINE
>>> 00000fb4 - 01 0104 SLINE
>>> 00000fb8 - 01 0105 SLINE
>>> 00000fbc - 01 0106 SLINE
>>> 00000fc0 - 01 0107 SLINE
>>> 00000fc4 - 01 0108 SLINE
>>> 00000ff4 - 01 0118 SLINE
>>> 00000fc8 - 01 0109 SLINE
>>> 00000fcc - 01 010a SLINE
>>> 00000fd0 - 01 010b SLINE
>>> 00000fd4 - 01 010c SLINE
>>> 00000ff0 - 01 0117 SLINE
>>> 00000fb0 - 01 0000   SOL /SourceCache/Csu/Csu-57//
>>> 00000fb0 - 01 0000   SOL /SourceCache/Csu/Csu-57/bundle1.s
>>> 00000fb0 - 01 0000   SOL /SourceCache/Csu/Csu-57/bundle1.s
>>> 00000fb0 - 01 0000   SOL /SourceCache/Csu/Csu-57/bundle1.s
>>> 00000fb0 - 01 0000    SO /Users/sebas/
>>> 00000fb0 - 01 0000    SO /Users/sebas/Desktop/Fortan_kmeans/ 
>>> kmeans3.f
>>> 00000fb0 - 01 0000   SOL <built-in>
>>> 00000fb0 - 01 0000   SOL <command line>
>>> 00000fe0 t __dyld_func_lookup
>>> 00000fe0 - 01 0113   FUN __dyld_func_lookup:F3
>>> 00000000 - 00 0000  LSYM __g77_f2c_address:t(0,10)=*(0,11)=@s8;r
>>> (0,11);-128;127;
>>> 00000000 - 00 0000  LSYM __g77_f2c_complex:t(0,7)=R3;8;0;
>>> 00000000 - 00 0000  LSYM __g77_f2c_doublecomplex:t(0,6)=R3;16;0;
>>> 00000000 - 00 0000  LSYM __g77_f2c_doublereal:t(0,8)=r(0,0);8;0;
>>> 00000000 - 00 0000  LSYM __g77_f2c_flag:t(0,3)=r
>>> (0,3);-2147483648;2147483647;
>>> 00000000 - 00 0000  LSYM __g77_f2c_ftnint:t(0,1)=r
>>> (0,1);-2147483648;2147483647;
>>> 00000000 - 00 0000  LSYM __g77_f2c_ftnlen:t(0,2)=r
>>> (0,2);-2147483648;2147483647;
>>> 00000000 - 00 0000  LSYM __g77_f2c_integer:t(0,12)=r
>>> (0,12);-2147483648;2147483647;
>>> 00000000 - 00 0000  LSYM __g77_f2c_logical:t(0,4)=r
>>> (0,4);-2147483648;2147483647;
>>> 00000000 - 00 0000  LSYM __g77_f2c_longint:t(0,5)=@s64;r(0,5);
>>> 001000000000000000000000;000777777777777777777777;
>>> 00000000 - 00 0000  LSYM __g77_f2c_real:t(0,9)=r(0,0);4;0;
>>> 00000000 t __mh_bundle_header
>>> 00000000 - 00 0000  LSYM byte:t(0,26)=@s8;r(0,26);-128;127;
>>> 00000000 - 00 0000  LSYM char:t(0,46)=@s8;r(0,46);0;255;
>>> 00000000 - 00 0000  LSYM char:t2=r2;0;127;
>>> 00000000 - 00 0000  LSYM complex double:t(0,31)=R3;16;0;
>>> 00000000 - 00 0000  LSYM complex float:t(0,32)=R3;8;0;
>>> 00000000 - 00 0000  LSYM complex int:t(0,33)=s8real:(0,34)=r
>>> (0,34);-2147483648;2147483647;,0,32;imag:(0,34),32,32;;
>>> 00000000 - 00 0000  LSYM complex long double:t(0,30)=R3;16;0;
>>> 00000000 - 00 0000  LSYM complex:t(0,14)=R3;8;0;
>>> 00000000 - 00 0000  LSYM double complex:t(0,13)=R3;16;0;
>>> 00000000 - 00 0000  LSYM double precision:t(0,15)=r(0,0);8;0;
>>> 00000000 - 00 0000  LSYM double:t(0,36)=r(0,34);8;0;
>>> 00001000 d dyld__mh_bundle_header
>>> 00001008 s dyld_func_lookup_pointer
>>> 00001004 s dyld_lazy_symbol_binding_entry_point
>>> 00000fb0 t dyld_stub_binding_helper
>>> 00000fb0 - 01 0103   FUN dyld_stub_binding_helper:F3
>>> 00000000 - 00 0000  LSYM float:t(0,37)=r(0,34);4;0;
>>> 00000000 - 00 0000   OPT gcc2_compiled.
>>> 00000000 - 00 0000  LSYM int:t(0,34)
>>> 00000000 - 00 0000  LSYM int:t1=r1;-2147483648;2147483647;
>>> 00000000 - 00 0000  LSYM integer4:t(0,22)=@s64;r(0,22);
>>> 001000000000000000000000;000777777777777777777777;
>>> 00000000 - 00 0000  LSYM integer:t(0,28)=r
>>> (0,28);-2147483648;2147483647;
>>> 00000000 - 00 0000  LSYM logical2:t(0,19)=@s8;r(0,19);-128;127;
>>> 00000000 - 00 0000  LSYM logical3:t(0,18)=@s16;r(0,18);-32768;32767;
>>> 00000000 - 00 0000  LSYM logical4:t(0,17)=@s64;r(0,17);
>>> 001000000000000000000000;000777777777777777777777;
>>> 00000000 - 00 0000  LSYM logical:t(0,20)=r
>>> (0,20);-2147483648;2147483647;
>>> 00000000 - 00 0000  LSYM long double:t(0,35)=r(0,34);8;0;
>>> 00000000 - 00 0000  LSYM long int:t(0,45)=r
>>> (0,45);-2147483648;2147483647;
>>> 00000000 - 00 0000  LSYM long long int:t(0,42)=@s64;r(0,42);
>>> 001000000000000000000000;000777777777777777777777;
>>> 00000000 - 00 0000  LSYM long long unsigned int:t(0,41)=@s64;r 
>>> (0,41);
>>> 000000000000000000000000;001777777777777777777777;
>>> 00000000 - 00 0000  LSYM long unsigned int:t(0,43)=r(0,43);
>>> 000000000000000000000000;000000000000037777777777;
>>> 00000000 - 00 0000  LSYM real:t(0,16)=r(0,0);4;0;
>>> 00000000 - 00 0000  LSYM short int:t(0,40)=@s16;r 
>>> (0,40);-32768;32767;
>>> 00000000 - 00 0000  LSYM short unsigned int:t(0,39)=@s16;r(0,39);
>>> 0;65535;
>>> 00000000 - 00 0000  LSYM signed char:t(0,11)
>>> 00000000 - 00 0000  LSYM unsigned byte:t(0,25)=@s8;r(0,25);0;255;
>>> 00000000 - 00 0000  LSYM unsigned char:t(0,38)=@s8;r(0,38);0;255;
>>> 00000000 - 00 0000  LSYM unsigned int:t(0,44)=r(0,44);
>>> 000000000000000000000000;000000000000037777777777;
>>> 00000000 - 00 0000  LSYM unsigned word:t(0,23)=@s16;r(0,23);0;65535;
>>> 00000000 - 00 0000  LSYM unsigned4:t(0,21)=@s64;r(0,21);
>>> 000000000000000000000000;001777777777777777777777;
>>> 00000000 - 00 0000  LSYM unsigned:t(0,27)=r(0,27);
>>> 000000000000000000000000;000000000000037777777777;
>>> 00000000 - 00 0000  LSYM void:t(0,29)=(0,29)
>>> 00000000 - 00 0000  LSYM void:t3=3
>>> 00000000 - 00 0000  LSYM word:t(0,24)=@s16;r(0,24);-32768;32767;
>>> 00000fb0 - 01 0000    SO {standard input}
>>> Double-G5:~ sebas$
>>>
>>> S.
>>>
>>> ______________________________________________
>>> R-devel at r-project.org mailing list
>>> https://stat.ethz.ch/mailman/listinfo/r-devel
>>>
>>>
>>>
>>>
>>
>> ==========================================================
>> Jan de Leeuw, 11667 Steinhoff Rd, Frazier Park, CA 93225,  
>> 661-245-1725
>> ==========================================================
>>                                      Und die Einen sind im Dunkeln
>>                                      Und die Andern sind im Licht
>>                                      Und man siehe die im Lichte
>>                                      Die im Dunklen sieht man nicht
>>
>>                                   Brecht
>>
>>
>>
>>
>>
>
> ______________________________________________
> R-devel at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-devel
>



[Rd] call fortran in R
=?ISO-8859-1?Q?S=E9bastien_Durand?=