From ligges at statistik.tu-dortmund.de  Wed Sep 30 18:48:31 2009
From: ligges at statistik.tu-dortmund.de (Uwe Ligges)
Date: Wed, 30 Sep 2009 18:48:31 +0200
Subject: [Rd] Installation problem from R 2.8.x
In-Reply-To: <Pine.LNX.4.64.0909301726210.17114@raven.linux.ox.ac.uk>
References: <Pine.LNX.4.64.0909301726210.17114@raven.linux.ox.ac.uk>
Message-ID: <4AC38BDF.6010308@statistik.tu-dortmund.de>

What you call a bug in R has never been reported since R-2.8.0 was 
recent. Hence I guess it is a permission issue on your system.
Or do you think nobody else tried to install a package during the last 
12 months?

Uwe Ligges


zong-pei.han at imm.ox.ac.uk wrote:
> Dear Developers,
> 
> Since 2.8, R installation has got a bug in it such
> that if a package has a "configure" file then it
> cannot be installed without modification.
> 
> For example:
> 
> * Installing *source* package 'foreign' ...
> ERROR: 'configure' exists but is not executable --
> see the 'R Installation and Adminstration Manual'
> * Removing '/usr/local/source_code/Linux/R/R-2.9.2/library/foreign'
> make[2]: *** [foreign.ts] Error 1
> 
> In fact, 'configure' is executable!!! So I have to manually
> run 'configure', remove 'configure', and then repackage
> foreign_0.8-37.tar.gz so it can be installed.
> 
> This bug makes it very time consuming to add any package
> which has a 'configure' in it. And the bug seems to be
> in  src/library/tools/R/install.R
> 
> Regards,
> 
> Dr Zong-Pei Han
> UNIX Systems Administrator
> Computational Biology Research Group
> University of Oxford
> http://www.cbrg.ox.ac.uk/
> 
> ______________________________________________
> R-devel at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-devel



[Rd] Installation problem from R 2.8.x
Uwe Ligges