From plummer at iarc.fr  Wed Oct 15 18:55:03 2008
From: plummer at iarc.fr (Martyn Plummer)
Date: Wed, 15 Oct 2008 18:55:03 +0200
Subject: [Rd] error installing gtools (PR#13168)
In-Reply-To: <20081015133004.62C22282EF48@mail.pubhealth.ku.dk>
References: <20081015133004.62C22282EF48@mail.pubhealth.ku.dk>
Message-ID: <1224089703.7387.28.camel@seurat.iarc.fr>

Ebi,

You need to install the R-devel RPM, which has the header files.
If this is a bug (which it arguably is) it is a problem with the Fedora
distribution, not with R itself.

Martyn

On Wed, 2008-10-15 at 15:30 +0200, ebihallo at gmail.com wrote:
> Full_Name: Ebi Hal
> Version: R-2.7.2-1
> OS: Fedora core 9
> Submission from: (NULL) (129.215.170.238)
> 
> 
> I tried to install gplots by running
> R> install.packages("gplots")
> but the process failed while installing "gtools" with the following error
> message:
> 
> * Installing to library '/usr/lib64/R/library'
> * Installing *source* package 'gtools' ...
> ** libs
> gcc -m64 -std=gnu99 -I/usr/include/R  -I/usr/local/include    -fpic  -O2 -g
> -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector
> --param=ssp-buffer-size=4 -m64 -mtune=generic -c setTCPNoDelay.c -o
> setTCPNoDelay.o
> setTCPNoDelay.c:1:15: error: R.h: No such file or directory
> setTCPNoDelay.c:2:24: error: Rinternals.h: No such file or directory
> setTCPNoDelay.c: In function ?checkStatus?:
> setTCPNoDelay.c:66: warning: implicit declaration of function ?strncpy?
> setTCPNoDelay.c:66: warning: incompatible implicit declaration of built-in
> function ?strncpy?
> setTCPNoDelay.c:72: warning: implicit declaration of function ?strerror?
> setTCPNoDelay.c:72: warning: passing argument 2 of ?strncpy? makes pointer from
> integer without a cast
> make: *** [setTCPNoDelay.o] Error 1
> ERROR: compilation failed for package 'gtools'
> ** Removing '/usr/lib64/R/library/gtools'
> 
> Indeed there are no such files as R.h and Rinternals.h
> 
> Any idea how can I solve this problem?
> 
> Thanks a lot,
> Ebi
> 
> ______________________________________________
> R-devel at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-devel

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[Rd] error installing gtools (PR#13168)
Martyn Plummer