From pgilbert@bank-banque-canada.ca  Fri Oct 16 18:52:56 1998
From: pgilbert@bank-banque-canada.ca (Paul Gilbert)
Date: Fri, 16 Oct 1998 13:52:56 -0400
Subject: gdb core dump
References: <Pine.GSO.4.03.9810160851380.13331-100000@wompom.biostat.washington.edu>
Message-ID: <98Oct16.140555edt.13472@mailgate.bank-banque-canada.ca>

>gorn% R -d gdb
...
>(gdb) backtrace

Thanks. Now I guess that gets me to the hard part. Does the following point out
a problem in R 0.62.3?

Paul
______

[4] /home/res4/gilp/dse/pub/Rdse : R -d gdb
GNU gdb 4.17
Copyright 1998 Free Software Foundation, Inc.
GDB is free software, covered by the GNU General Public License, and you are
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Type "show copying" to see the conditions.
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This GDB was configured as "sparc-sun-solaris2.6"...
(gdb) core-file core
Core was generated by `/home/res4/gilp/R-versions/R-0.62.3/bin/R.binary -v6
-n250000 --no-save'.
Program terminated with signal 11, Segmentation Fault.
Reading symbols from /usr/openwin/lib/libSM.so.6...done.
Reading symbols from /usr/openwin/lib/libICE.so.6...done.
Reading symbols from /usr/openwin/lib/libX11.so.4...done.
Reading symbols from /usr/lib/libsocket.so.1...done.
Reading symbols from /usr/lib/libnsl.so.1...done.
Reading symbols from /usr/lib/libdl.so.1...done.
Reading symbols from /usr/lib/libm.so.1...done.
Reading symbols from /usr/lib/libc.so.1...done.
Reading symbols from /usr/openwin/lib/libXext.so.0...done.
Reading symbols from /usr/lib/libmp.so.2...done.
Reading symbols from /usr/platform/SUNW,Ultra-5_10/lib/libc_psr.so.1...done.
Reading symbols from /usr/lib/locale/en_CA/en_CA.so.1...done.
Reading symbols from /home/res4/gilp/dse/pub/Rdse/rlibs/dse/libs/dse.so...done.
Reading symbols from
/home/res4/gilp/R-versions/R-0.62.3/library/mva/libs/mva.so...done.
#0  do_nextmethod (call=0x2c7f94, op=0x5cc014, args=0x2c7f08, env=0x110e44)
    at objects.c:302
302    if( (CAR(m) == CAR(t)) && !ARGUSED(s) ) {
(gdb) backtrace
#0  do_nextmethod (call=0x2c7f94, op=0x5cc014, args=0x2c7f08, env=0x110e44)
    at objects.c:302
#1  0x49bb4 in do_internal (call=0xe8950, op=0x10f288, args=0x2c7f08,
    env=0x110e44) at names.c:768
#2  0x3a8f8 in eval (e=0x2c7ff8, rho=0x110e44) at eval.c:156
#3  0x3ac4c in applyClosure (call=0x366464, op=0x2c8084, arglist=0x111420,
    rho=0x111c40, suppliedenv=0x107560) at eval.c:269
#4  0x3a974 in eval (e=0x366464, rho=0x111c40) at eval.c:165
#5  0x3bcf4 in do_set (call=0x3664a0, op=0x107d1c, args=0x36648c, rho=0x111c40)
    at eval.c:749
#6  0x3a8f8 in eval (e=0x3664a0, rho=0x111c40) at eval.c:156
#7  0x3b738 in do_begin (call=0x3664b4, op=0x107dbc, args=0x3664c8,
    rho=0x111c40) at eval.c:560
#8  0x3a8f8 in eval (e=0x3664b4, rho=0x111c40) at eval.c:156
#9  0x3ac4c in applyClosure (call=0x112ac8, op=0x367a44, arglist=0x113158,
    rho=0x12f45c, suppliedenv=0x112b2c) at eval.c:269
#10 0x49e00 in applyMethod (call=0x112ac8, op=0x367a44, args=0x113158,
    rho=0x12f45c, newrho=0x112b2c) at objects.c:66
#11 0x4a198 in usemethod (generic=0xefffb228 "[", obj=0x0, call=0x112ac8,
    args=0x113158, rho=0x12f45c, ans=0xefffb31c) at objects.c:174
#12 0x3c694 in DispatchOrEval (call=0x4dfc50, op=0x107e20, args=0x113158,
    rho=0x12f45c, ans=0xefffb31c, dropmissing=0) at eval.c:1085
#13 0x73164 in do_subset (call=0x4dfc50, op=0x107e20, args=0xfcc00,
    rho=0x12f45c) at subset.c:469
#14 0x3a8f8 in eval (e=0x4dfc50, rho=0x12f45c) at eval.c:156
#15 0x3bcf4 in do_set (call=0x4dfc8c, op=0x107d1c, args=0x4dfc78, rho=0x12f45c)
    at eval.c:749
#16 0x3a8f8 in eval (e=0x4dfc8c, rho=0x12f45c) at eval.c:156
#17 0x3b738 in do_begin (call=0x4dfb10, op=0x107dbc, args=0x4dfca0,
    rho=0x12f45c) at eval.c:560
#18 0x3a8f8 in eval (e=0x4dfb10, rho=0x12f45c) at eval.c:156
#19 0x3aef8 in do_if (call=0x4e0010, op=0x1079fc, args=0x4dfffc, rho=0x12f45c)
    at eval.c:353
---Type <return> to continue, or q <return> to quit---
#20 0x3a8f8 in eval (e=0x4e0010, rho=0x12f45c) at eval.c:156
#21 0x3b738 in do_begin (call=0x4e0024, op=0x107dbc, args=0x4e0038,
    rho=0x12f45c) at eval.c:560
#22 0x3a8f8 in eval (e=0x4e0024, rho=0x12f45c) at eval.c:156
#23 0x3ac4c in applyClosure (call=0x12ffb0, op=0x5292b0, arglist=0x130820,
    rho=0x1306e0, suppliedenv=0x1306b8) at eval.c:269
#24 0x49e00 in applyMethod (call=0x12ffb0, op=0x5292b0, args=0x130820,
    rho=0x1306e0, newrho=0x1306b8) at objects.c:66
#25 0x4a198 in usemethod (generic=0xefffbb58 "output.data", obj=0x0,
    call=0x12ffb0, args=0x130820, rho=0x1306e0, ans=0xefffbb54)
    at objects.c:174
#26 0x4a44c in do_usemethod (call=0x4cfa94, op=0x10f260, args=0x4cfa80,
    env=0x1306e0) at objects.c:242
#27 0x3a8f8 in eval (e=0x4cfa94, rho=0x1306e0) at eval.c:156
#28 0x3ac4c in applyClosure (call=0x4734ec, op=0x526394, arglist=0x130820,
    rho=0x1d4420, suppliedenv=0x107560) at eval.c:269
#29 0x3a974 in eval (e=0x4734ec, rho=0x1d4420) at eval.c:165
#30 0x3a734 in eval (e=0x133b38, rho=0x1336d8) at eval.c:118
#31 0x3a674 in eval (e=0x113694, rho=0x1336d8) at eval.c:100
#32 0x3a734 in eval (e=0x1313c4, rho=0x1336d8) at eval.c:118
#33 0x3c5c8 in DispatchOrEval (call=0x452580, op=0x107e20, args=0x1312fc,
    rho=0x1336d8, ans=0xefffc0cc, dropmissing=0) at eval.c:1076
#34 0x73164 in do_subset (call=0x452580, op=0x107e20, args=0xfcc00,
    rho=0x1336d8) at subset.c:469
#35 0x3a8f8 in eval (e=0x452580, rho=0x1336d8) at eval.c:156
#36 0x3bf40 in evalList (el=0x452594, rho=0x1336d8) at eval.c:825
#37 0x3a884 in eval (e=0x4525bc, rho=0x1336d8) at eval.c:154
#38 0x3bcf4 in do_set (call=0x4525f8, op=0x107d1c, args=0x4525e4, rho=0x1336d8)
    at eval.c:749
#39 0x3a8f8 in eval (e=0x4525f8, rho=0x1336d8) at eval.c:156
#40 0x3b738 in do_begin (call=0x452648, op=0x107dbc, args=0x45265c,
    rho=0x1336d8) at eval.c:560
#41 0x3a8f8 in eval (e=0x452648, rho=0x1336d8) at eval.c:156
---Type <return> to continue, or q <return> to quit---
#42 0x3ac4c in applyClosure (call=0x4735b4, op=0x520304, arglist=0x133ee4,
    rho=0x1d4420, suppliedenv=0x107560) at eval.c:269
#43 0x3a974 in eval (e=0x4735b4, rho=0x1d4420) at eval.c:165
#44 0x3a734 in eval (e=0x1349c0, rho=0x134308) at eval.c:118
#45 0x3a674 in eval (e=0x111330, rho=0x134308) at eval.c:100
#46 0x3bf40 in evalList (el=0x1211f4, rho=0x134308) at eval.c:825
#47 0x3a884 in eval (e=0x121208, rho=0x134308) at eval.c:154
#48 0x3bcf4 in do_set (call=0x121244, op=0x107d1c, args=0x121230, rho=0x134308)
    at eval.c:749
#49 0x3a8f8 in eval (e=0x121244, rho=0x134308) at eval.c:156
#50 0x3b738 in do_begin (call=0x121258, op=0x107dbc, args=0x12126c,
    rho=0x134308) at eval.c:560
#51 0x3a8f8 in eval (e=0x121258, rho=0x134308) at eval.c:156
#52 0x3ac4c in applyClosure (call=0x473730, op=0x121848, arglist=0x134998,
    rho=0x1d4420, suppliedenv=0x107560) at eval.c:269
#53 0x3a974 in eval (e=0x473730, rho=0x1d4420) at eval.c:165
#54 0x3bcf4 in do_set (call=0x47376c, op=0x107d1c, args=0x473758, rho=0x1d4420)
    at eval.c:749
#55 0x3a8f8 in eval (e=0x47376c, rho=0x1d4420) at eval.c:156
#56 0x3b738 in do_begin (call=0x46903c, op=0x107dbc, args=0x473780,
    rho=0x1d4420) at eval.c:560
#57 0x3a8f8 in eval (e=0x46903c, rho=0x1d4420) at eval.c:156
#58 0x3ac4c in applyClosure (call=0x3242f8, op=0x520fe8, arglist=0x1d4ec0,
    rho=0x5cb7b8, suppliedenv=0x107560) at eval.c:269
#59 0x3a974 in eval (e=0x3242f8, rho=0x5cb7b8) at eval.c:165
#60 0x3bcf4 in do_set (call=0x324280, op=0x107d1c, args=0x3242d0, rho=0x5cb7b8)
    at eval.c:749
#61 0x3a8f8 in eval (e=0x324280, rho=0x5cb7b8) at eval.c:156
#62 0x3b738 in do_begin (call=0x325bf8, op=0x107dbc, args=0x32426c,
    rho=0x5cb7b8) at eval.c:560
#63 0x3a8f8 in eval (e=0x325bf8, rho=0x5cb7b8) at eval.c:156
#64 0x3b278 in do_for (call=0x323bc8, op=0x107a9c, args=0x323bdc, rho=0x5cb7b8)
    at eval.c:435
---Type <return> to continue, or q <return> to quit---
#65 0x3a8f8 in eval (e=0x323bc8, rho=0x5cb7b8) at eval.c:156
#66 0x3b738 in do_begin (call=0x32638c, op=0x107dbc, args=0x323b8c,
    rho=0x5cb7b8) at eval.c:560
#67 0x3a8f8 in eval (e=0x32638c, rho=0x5cb7b8) at eval.c:156
#68 0x3aef8 in do_if (call=0x31e31c, op=0x1079fc, args=0x31e3f8, rho=0x5cb7b8)
    at eval.c:353
#69 0x3a8f8 in eval (e=0x31e31c, rho=0x5cb7b8) at eval.c:156
#70 0x3b738 in do_begin (call=0x3278f4, op=0x107dbc, args=0x31e308,
    rho=0x5cb7b8) at eval.c:560
#71 0x3a8f8 in eval (e=0x3278f4, rho=0x5cb7b8) at eval.c:156
#72 0x3ac4c in applyClosure (call=0x328718, op=0x5820f4, arglist=0x5cbca4,
    rho=0x1409b4, suppliedenv=0x107560) at eval.c:269
#73 0x3a974 in eval (e=0x328718, rho=0x1409b4) at eval.c:165
#74 0x3b738 in do_begin (call=0x3298fc, op=0x107dbc, args=0x328704,
    rho=0x1409b4) at eval.c:560
#75 0x3a8f8 in eval (e=0x3298fc, rho=0x1409b4) at eval.c:156
#76 0x3ac4c in applyClosure (call=0x141738, op=0x5822e8, arglist=0x141698,
    rho=0x148eac, suppliedenv=0x107560) at eval.c:269
#77 0x3a974 in eval (e=0x141738, rho=0x148eac) at eval.c:165
#78 0x2a8d8 in do_docall (call=0x141738, op=0x10c240, args=0x148e0c,
    rho=0x148eac) at coerce.c:1230
#79 0x49bb4 in do_internal (call=0xe8950, op=0x10c218, args=0x148e0c,
    env=0x148eac) at names.c:768
#80 0x3a8f8 in eval (e=0x2c0e4c, rho=0x148eac) at eval.c:156
#81 0x3ac4c in applyClosure (call=0x33632c, op=0x2c0ed8, arglist=0x14903c,
    rho=0x5176c8, suppliedenv=0x107560) at eval.c:269
#82 0x3a974 in eval (e=0x33632c, rho=0x5176c8) at eval.c:165
#83 0x3bcf4 in do_set (call=0x336264, op=0x107d1c, args=0x336304, rho=0x5176c8)
    at eval.c:749
#84 0x3a8f8 in eval (e=0x336264, rho=0x5176c8) at eval.c:156
#85 0x3b738 in do_begin (call=0x336228, op=0x107dbc, args=0x336214,
    rho=0x5176c8) at eval.c:560
#86 0x3a8f8 in eval (e=0x336228, rho=0x5176c8) at eval.c:156
---Type <return> to continue, or q <return> to quit---
#87 0x3aef8 in do_if (call=0x334bf8, op=0x1079fc, args=0x334c0c, rho=0x5176c8)
    at eval.c:353
#88 0x3a8f8 in eval (e=0x334bf8, rho=0x5176c8) at eval.c:156
#89 0x3b738 in do_begin (call=0x33a2c4, op=0x107dbc, args=0x334bbc,
    rho=0x5176c8) at eval.c:560
#90 0x3a8f8 in eval (e=0x33a2c4, rho=0x5176c8) at eval.c:156
#91 0x3ac4c in applyClosure (call=0x2e5a6c, op=0x5825e0, arglist=0x517b64,
    rho=0x56e144, suppliedenv=0x107560) at eval.c:269
#92 0x3a974 in eval (e=0x2e5a6c, rho=0x56e144) at eval.c:165
#93 0x3bcf4 in do_set (call=0x2e5a30, op=0x107d1c, args=0x2e5a44, rho=0x56e144)
    at eval.c:749
#94 0x3a8f8 in eval (e=0x2e5a30, rho=0x56e144) at eval.c:156
#95 0x3b738 in do_begin (call=0x2e74fc, op=0x107dbc, args=0x2e5a08,
    rho=0x56e144) at eval.c:560
#96 0x3a8f8 in eval (e=0x2e74fc, rho=0x56e144) at eval.c:156
#97 0x3ac4c in applyClosure (call=0x155148, op=0x57fcc8, arglist=0x56e374,
    rho=0x10f594, suppliedenv=0x107560) at eval.c:269
#98 0x3a974 in eval (e=0x155148, rho=0x10f594) at eval.c:165
#99 0x3a778 in eval (e=0x56e694, rho=0x10f594) at eval.c:129
#100 0x3c458 in do_eval (call=0x1dbd60, op=0x10f594, args=0x56e400,
    rho=0x56e48c) at eval.c:1007
#101 0x49bb4 in do_internal (call=0xe8950, op=0x10d938, args=0x56e400,
    env=0x56e48c) at names.c:768
#102 0x3a8f8 in eval (e=0x1dbdc4, rho=0x56e48c) at eval.c:156
#103 0x3ac4c in applyClosure (call=0x31ff64, op=0x1dbe50, arglist=0x56e5f4,
    rho=0x15e6e4, suppliedenv=0x107560) at eval.c:269
#104 0x3a974 in eval (e=0x31ff64, rho=0x15e6e4) at eval.c:165
#105 0x3bcf4 in do_set (call=0x31ffa0, op=0x107d1c, args=0x31ff8c,
    rho=0x15e6e4) at eval.c:749
#106 0x3a8f8 in eval (e=0x31ffa0, rho=0x15e6e4) at eval.c:156
#107 0x3b738 in do_begin (call=0x31f3ac, op=0x107dbc, args=0x31ffb4,
    rho=0x15e6e4) at eval.c:560
#108 0x3a8f8 in eval (e=0x31f3ac, rho=0x15e6e4) at eval.c:156
---Type <return> to continue, or q <return> to quit---
#109 0x3b278 in do_for (call=0x321238, op=0x107a9c, args=0x321224,
    rho=0x15e6e4) at eval.c:435
#110 0x3a8f8 in eval (e=0x321238, rho=0x15e6e4) at eval.c:156
#111 0x3b738 in do_begin (call=0x31e808, op=0x107dbc, args=0x32124c,
    rho=0x15e6e4) at eval.c:560
#112 0x3a8f8 in eval (e=0x31e808, rho=0x15e6e4) at eval.c:156
#113 0x3ac4c in applyClosure (call=0x15f210, op=0x321350, arglist=0x15ef18,
    rho=0x10f594, suppliedenv=0x107560) at eval.c:269
#114 0x3a974 in eval (e=0x15f210, rho=0x10f594) at eval.c:165
#115 0x435d8 in R_ReplConsole (rho=0x10f594, savestack=0, browselevel=0)
    at main.c:260
#116 0x43a04 in mainloop () at main.c:439
#117 0x8bd40 in main (ac=0, av=0xefffefe8) at system.c:498
(gdb)

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gdb core dump
Paul Gilbert