From manager at molbiol.ox.ac.uk  Mon Apr 25 14:12:11 2005
From: manager at molbiol.ox.ac.uk (manager@molbiol.ox.ac.uk)
Date: Mon Apr 25 14:12:19 2005
Subject: [Rd] Failed to install gbm_1.4-2 (PR#7814)
Message-ID: <20050425121211.EF9C7A21A@slim.kubism.ku.dk>

Full_Name: The Manager
Version: 2.0.1
OS: Solaris 9
Submission from: (NULL) (129.67.80.243)


> install.packages("gbm")
trying URL `http://cran.uk.r-project.org/src/contrib/PACKAGES'
Content type `text/plain; charset=ISO-8859-1' length 52975 bytes
opened URL
==================================================
downloaded 51Kb

trying URL `http://cran.uk.r-project.org/src/contrib/gbm_1.4-2.tar.gz'
Content type `application/x-gzip' length 252551 bytes
opened URL
==================================================
downloaded 246Kb
* Installing *source* package 'gbm' ...
** libs
g++ -I/package/R/2.0.1-32bit/lib/R/include  -I/usr/local/include   -fPIC  -O2 -c
adaboost.cpp -oadaboost.o
g++ -I/package/R/2.0.1-32bit/lib/R/include  -I/usr/local/include   -fPIC  -O2 -c
bernoulli.cpp -o bernoulli.o
g++ -I/package/R/2.0.1-32bit/lib/R/include  -I/usr/local/include   -fPIC  -O2 -c
coxph.cpp -o coxph.o
g++ -I/package/R/2.0.1-32bit/lib/R/include  -I/usr/local/include   -fPIC  -O2 -c
dataset.cpp -o dataset.o
g++ -I/package/R/2.0.1-32bit/lib/R/include  -I/usr/local/include   -fPIC  -O2 -c
distribution.cpp -o distribution.o
g++ -I/package/R/2.0.1-32bit/lib/R/include  -I/usr/local/include   -fPIC  -O2 -c
gaussian.cpp -ogaussian.o
g++ -I/package/R/2.0.1-32bit/lib/R/include  -I/usr/local/include   -fPIC  -O2 -c
gbm.cpp -o gbm.o
g++ -I/package/R/2.0.1-32bit/lib/R/include  -I/usr/local/include   -fPIC  -O2 -c
gbm_engine.cpp -o gbm_engine.o
g++ -I/package/R/2.0.1-32bit/lib/R/include  -I/usr/local/include   -fPIC  -O2 -c
gbmentry.cpp -ogbmentry.o
gbmentry.cpp: In function `SEXPREC* gbm_shrink_pred(SEXPREC*, SEXPREC*,
SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*, SEXPREC*,
SEXPREC*)':
gbmentry.cpp:677: error: `NAN' undeclared (first use this function)
gbmentry.cpp:677: error: (Each undeclared identifier is reported only once for
each function it appears in.)
make: *** [gbmentry.o] Error 1
ERROR: compilation failed for package 'gbm'
** Removing '/package/R/2.0.1-32bit/lib/R/library/gbm'
** Restoring previous '/package/R/2.0.1-32bit/lib/R/library/gbm'

Delete downloaded files (y/N)? y

Warning message:
Installation of package gbm had non-zero exit status in:
install.packages("gbm")
> q()


[Rd] Failed to install gbm_1.4-2 (PR#7814)
manager@molbiol.ox.ac.uk