From gavin.simpson at ucl.ac.uk  Sat Jan 21 19:52:09 2006
From: gavin.simpson at ucl.ac.uk (Gavin Simpson)
Date: Sat, 21 Jan 2006 18:52:09 +0000
Subject: [Rd] Bug in xy.coords() or documentation error?
In-Reply-To: <971536df0601211039h3d84cddei18c2c02a5eb5d3c3@mail.gmail.com>
References: <1137866719.2523.33.camel@dsl-217-155-166-107.zen.co.uk>
	<971536df0601211012t19e45314ieb573d8acf71a32b@mail.gmail.com>
	<1137867712.2523.41.camel@dsl-217-155-166-107.zen.co.uk>
	<971536df0601211039h3d84cddei18c2c02a5eb5d3c3@mail.gmail.com>
Message-ID: <1137869529.2523.44.camel@dsl-217-155-166-107.zen.co.uk>

On Sat, 2006-01-21 at 13:39 -0500, Gabor Grothendieck wrote:
> I think the docs have been changed for the next vesion
> of R.

Not in R Version 2.3.0 Under development (unstable) (2006-01-18 r37123)
downloaded today.

G

> 
> On 1/21/06, Gavin Simpson <gavin.simpson at ucl.ac.uk> wrote:
> > On Sat, 2006-01-21 at 13:12 -0500, Gabor Grothendieck wrote:
> > > This was discussed just recently.   This is a design
> > > error but the maintainers claim there are no cases of
> > > interest where it matters.
> >
> > Thanks Gabor,
> >
> > I must have missed that discussion whilst I was on vacation. If what you
> > say was the outcome of that discussion, it still means that the
> > documentation for xy.coords is in error, as you may *not* provide a
> > single argument 'x'.
> >
> > If the intention is to keep the current behaviour - which is fine - then
> > the documentation should be changed, perhaps along the lines of:
> >
> >    x, y: the x and y coordinates of a set of points. Alternatively, a
> >          single object 'x' can be provided if 'y = NULL' is also
> >          supplied.
> >
> > 'object' might not be correct here - is a formula an 'object'?
> >
> > Cheers,
> >
> > Gav
> >
> > >
> > > On 1/21/06, Gavin Simpson <gavin.simpson at ucl.ac.uk> wrote:
> > > > Hi,
> > > >
> > > > I noticed the following problem with xy.coords() in R 2.2.1-patched
> > > > (version info at the foot of this email) and R 2.3.0 unstable
> > > > (subversion no: r37123):
> > > >
> > > > > xy.coords(x = matrix(1:20, ncol = 2))
> > > > Error in xy.coords(x = matrix(1:20, ncol = 2)) :
> > > >        argument "y" is missing, with no default
> > > > > xy.coords(x = matrix(1:20, ncol = 2), y = NULL)
> > > > $x
> > > >  [1]  1  2  3  4  5  6  7  8  9 10
> > > >
> > > > $y
> > > >  [1] 11 12 13 14 15 16 17 18 19 20
> > > >
> > > > $xlab
> > > > [1] "[,1]"
> > > >
> > > > $ylab
> > > > [1] "[,2]"
> > > >
> > > > And:
> > > >
> > > > > xy.coords(x = data.frame(x = 1:10, y = 1:10))
> > > > Error in xy.coords(x = data.frame(x = 1:10, y = 1:10)) :
> > > >        argument "y" is missing, with no default
> > > > > xy.coords(x = data.frame(x = 1:10, y = 1:10), y = NULL)
> > > > $x
> > > >  [1]  1  2  3  4  5  6  7  8  9 10
> > > >
> > > > $y
> > > >  [1]  1  2  3  4  5  6  7  8  9 10
> > > >
> > > > $xlab
> > > > [1] "x"
> > > >
> > > > $ylab
> > > > [1] "y"
> > > >
> > > > ... for example.
> > > >
> > > > ?xy.coords states:
> > > >
> > > >    x, y: the x and y coordinates of a set of points. Alternatively, a
> > > >          single argument 'x' can be provided.
> > > >
> > > > Given that, I would have thought the above examples would have worked
> > > > without explicitly passing y = NULL to xy.coords(). However, ?xy,coords
> > > > later states:
> > > >
> > > >    If 'y' is 'NULL' and 'x' is a
> > > >
> > > > and the examples all illustrate the use of NULL passed as y.
> > > >
> > > > Is this a documentation error and a single argument x is not allowed, or
> > > > is this a bug in the code? Either way, ?xy.coords contradicts itself as
> > > > one would expect to be able to pass only x given the statement above.
> > > >
> > > > If this is a bug in the code, a potential workaround appears to be to
> > > > change the first line of xy.coords from:
> > > >
> > > >   if (is.null(y)) {
> > > >
> > > > to
> > > >
> > > >   if (missing(y) || is.null(y)) {
> > > >
> > > > but I haven't tested this on anything other than my two examples.
> > > >
> > > > I will file a bug report if my observation is correct - but given all
> > > > the erroneous bug reports lately, I thought I'd try my luck here where
> > > > an error on my part would not cause the maintainers of the bug tracker
> > > > any extra work.
> > > >
> > > > > version
> > > >         _
> > > > platform i686-pc-linux-gnu
> > > > arch     i686
> > > > os       linux-gnu
> > > > system   i686, linux-gnu
> > > > status   Patched
> > > > major    2
> > > > minor    2.1
> > > > year     2006
> > > > month    01
> > > > day      18
> > > > svn rev  37123
> > > > language R
> > > > > sessionInfo()
> > > > R version 2.2.1, 2006-01-18, i686-pc-linux-gnu
> > > >
> > > > attached base packages:
> > > > [1] "methods"   "stats"     "graphics"  "grDevices"
> > > > [5] "utils"     "datasets"  "base"
> > > >
> > > > All the best,
> > > >
> > > > Gav
> > > >
> > > > --
> > > > %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%
> > > > Gavin Simpson                     [T] +44 (0)20 7679 5522
> > > > ENSIS Research Fellow             [F] +44 (0)20 7679 7565
> > > > ENSIS Ltd. & ECRC                 [E] gavin.simpsonATNOSPAMucl.ac.uk
> > > > UCL Department of Geography       [W] http://www.ucl.ac.uk/~ucfagls/cv/
> > > > 26 Bedford Way                    [W] http://www.ucl.ac.uk/~ucfagls/
> > > > London.  WC1H 0AP.
> > > > %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%
> > > >
> > > > ______________________________________________
> > > > R-devel at r-project.org mailing list
> > > > https://stat.ethz.ch/mailman/listinfo/r-devel
> > > >
> > --
> > %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%
> > Gavin Simpson                     [T] +44 (0)20 7679 5522
> > ENSIS Research Fellow             [F] +44 (0)20 7679 7565
> > ENSIS Ltd. & ECRC                 [E] gavin.simpsonATNOSPAMucl.ac.uk
> > UCL Department of Geography       [W] http://www.ucl.ac.uk/~ucfagls/cv/
> > 26 Bedford Way                    [W] http://www.ucl.ac.uk/~ucfagls/
> > London.  WC1H 0AP.
> > %~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%~%
> >
> >
-- 
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Gavin Simpson                     [T] +44 (0)20 7679 5522
ENSIS Research Fellow             [F] +44 (0)20 7679 7565
ENSIS Ltd. & ECRC                 [E] gavin.simpsonATNOSPAMucl.ac.uk
UCL Department of Geography       [W] http://www.ucl.ac.uk/~ucfagls/cv/
26 Bedford Way                    [W] http://www.ucl.ac.uk/~ucfagls/
London.  WC1H 0AP.
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[Rd] Bug in xy.coords() or documentation error?
Gavin Simpson