From ripley at stats.ox.ac.uk  Fri Jan 31 12:03:51 2014
From: ripley at stats.ox.ac.uk (Prof Brian Ripley)
Date: Fri, 31 Jan 2014 11:03:51 +0000
Subject: [Rd] INTEL MKL 11.1.0.080 R 3.0.2
In-Reply-To: <CAFkVQ9OqjiR8Ai7vmwJ0UQyMo6_3+7R-Drscvgzb7sndwtY7eg@mail.gmail.com>
References: <CAFkVQ9OqjiR8Ai7vmwJ0UQyMo6_3+7R-Drscvgzb7sndwtY7eg@mail.gmail.com>
Message-ID: <52EB8317.3060003@stats.ox.ac.uk>

On 31/01/2014 06:43, Steven Varga wrote:
> I am having trouble of compiling R 3.0.2 with MKL 11.1.0.080; tried the
> following resources:
>
> http://software.intel.com/en-us/articles/intel-mkl-link-line-advisor
> http://cran.r-project.org/doc/manuals/R-admin.html#MKL
> http://software.intel.com/en-us/comment/reply/328415
>
> and getting the following:
> *checking for dgemm_ in -Wl,--start-group -lmkl_gf_lp64 -lmkl_gnu_thread
> -lmkl_core -Wl,--end-group -lgomp -lpthread... no*
> *checking for dgemm_... no*
>
>      libblas.so.3 => /usr/lib/libblas.so.3 (0x00007f8daec19000)
>      libm.so.6 => /lib/x86_64-linux-gnu/libm.so.6 (0x00007f8dae915000)
>      libgomp.so.1 => /usr/lib/x86_64-linux-gnu/libgomp.so.1
> (0x00007f8dade94000)
>      libpthread.so.0 => /lib/x86_64-linux-gnu/libpthread.so.0
> (0x00007f8dadc77000)
>      libgfortran.so.3 => /usr/lib/x86_64-linux-gnu/libgfortran.so.3
> (0x00007f8dad596000)
>      libquadmath.so.0 => /usr/lib/x86_64-linux-gnu/libquadmath.so.0
> (0x00007f8dacf1a000)
>
>
> Tried sourcing mkl from bash and used both local and online intel mkl link
> util without success.
>
> can someone point what I am doing wrong?

File config.log does, and we do not have access to it.

> did anyone succeed with the above configuration?

How could anyone know that?  (You have not even told us your OS nor 
compiler.)

> thanks
>
> 	[[alternative HTML version deleted]]

See the posting guide ... HTML is not welcome here.
>
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>


-- 
Brian D. Ripley,                  ripley at stats.ox.ac.uk
Professor of Applied Statistics,  http://www.stats.ox.ac.uk/~ripley/
University of Oxford,             Tel:  +44 1865 272861 (self)
1 South Parks Road,                     +44 1865 272866 (PA)
Oxford OX1 3TG, UK                Fax:  +44 1865 272595



[Rd] INTEL MKL 11.1.0.080 R 3.0.2
Prof Brian Ripley