From ankheedutta at gmail.com  Tue Mar 31 06:30:11 2009
From: ankheedutta at gmail.com (ankheedutta at gmail.com)
Date: Tue, 31 Mar 2009 06:30:11 +0200 (CEST)
Subject: [Rd] installing RMySQL (PR#13633)
Message-ID: <20090331043011.D20E92832183@mail.pubhealth.ku.dk>

Full_Name: Ankhee Dutta
Version: 2.3
OS: LINUX
Submission from: (NULL) (202.141.12.97)




I have a linux system of Mandriva-2007 with R version 2.3.0 and MySQL with
5.0.0. I have also got DBI-R database interface version-0.1-11 installed on
my Linux system.While installing RMySQL package version 0.5-11 i am  facing
 problem .

while installation the error report which is coming is as follows:



* Installing *source* package 'RMySQL' ...
creating cache ./config.cache
checking how to run the C preprocessor... cc -E
checking for compress in -lz... yes
checking for getopt_long in -lc... yes
checking for mysql_init in -lmysqlclient... no
checking for mysql.h... no
checking for mysql_init in -lmysqlclient... no
checking for mysql_init in -lmysqlclient... no
checking for mysql_init in -lmysqlclient... no
checking for mysql_init in -lmysqlclient... no
checking for mysql_init in -lmysqlclient... no
checking for /usr/local/include/mysql/mysql.h... no
checking for /usr/include/mysql/mysql.h... no
checking for /usr/local/mysql/include/
mysql/mysql.h... no
checking for /opt/include/mysql/mysql.h... no
checking for /include/mysql/mysql.h... no

Configuration error:
 could not find the MySQL installation include and/or library
 directories.  Manually specify the location of the MySQL
 libraries and the header files and re-run R CMD INSTALL.

INSTRUCTIONS:

1. Define and export the 2 shell variables PKG_CPPFLAGS and
  PKG_LIBS to include the directory for header files (*.h)
  and libraries, for example (using Bourne shell syntax):

     export PKG_CPPFLAGS="-I<MySQL-include-dir>"
     export PKG_LIBS="-L<MySQL-lib-dir> -lmysqlclient"

  Re-run the R INSTALL command:

     R CMD INSTALL RMySQL_<version>.tar.gz

2. Alternatively, you may pass the configure arguments
     --with-mysql-dir=<base-dir> (distribution directory)
  or
     --with-mysql-inc=<base-inc> (where MySQL header files reside)
     --with-mysql-lib=<base-lib> (where MySQL libraries reside)
  in the call to R INSTALL --configure-args='...'

  R CMD INSTALL --configure-args='--with-mysql-dir=DIR'
RMySQL_<version>.tar.gz

ERROR: configuration failed for package 'RMySQL'
** Removing '/usr/lib/R/library/RMySQL'



[Rd] installing RMySQL (PR#13633)
ankheedutta at gmail.com