From pdalgd at gmail.com  Wed Sep 17 17:32:19 2014
From: pdalgd at gmail.com (peter dalgaard)
Date: Wed, 17 Sep 2014 17:32:19 +0200
Subject: [Rd] issue with compiling r6
In-Reply-To: <5419A306.2070009@mcmaster.ca>
References: <5419A306.2070009@mcmaster.ca>
Message-ID: <DF610537-0A50-4CE5-9739-2AA91F47CF2A@gmail.com>


On 17 Sep 2014, at 17:04 , Ben Bolker <bbolker at gmail.com> wrote:

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>  I am painfully aware that this is most likely a problem with my
> system, but I am nevertheless going to ask if anyone has any
> ideas/suggestions for diagnosis and trouble-shooting.
> 

Others have been seeing this since r66622, so I think you're just suffering the "unsuffered consequences" (unsuffered by regular users, that is; people who run development versions will suffer occasionally). Just hang on for a while. 

> - From a clean checkout of release 66624 on Ubuntu 12.04 (32-bit, sorry!):

That's _revision_ 66624, please. It is only "released" in the sense that it isn't kept secret. 

-pd

> gcc (Ubuntu/Linaro 4.6.4-1ubuntu1~12.04) 4.6.4
> 
> svn checkout https://svn.r-project.org/R/trunk/
> tools/rsync-recommended
> 
> cd ../r-build
> ../r-devel/configure
> 
> R is now configured for i686-pc-linux-gnu
> 
>  Source directory:          ../r-devel
>  Installation directory:    /usr/local
> 
>  C compiler:                gcc -std=gnu99  -g -O2
>  Fortran 77 compiler:       gfortran  -g -O2
> 
>  C++ compiler:              g++  -g -O2
>  C++ 11 compiler:           g++  -std=c++0x -g -O2
>  Fortran 90/95 compiler:    gfortran -g -O2
>  Obj-C compiler:	
> 
>  Interfaces supported:      X11, tcltk
>  External libraries:        readline, lzma
>  Additional capabilities:   PNG, JPEG, TIFF, NLS, cairo
>  Options enabled:           shared BLAS, R profiling
> 
>  Capabilities skipped:      ICU
>  Options not enabled:       memory profiling
> 
> make fails at:
> 
> byte-compiling 'methods'
> initializing class and method definitions ...Error: .onLoad failed in
> loadNamespace() for 'methods', details:
>  call: new("classRepresentation")
>  error: could not find function "isVirtualClass"
> 
> The only other oddity of my system/potential clue is that symbolic
> links sometimes behave strangely because I am working on a VirtualBox
> virtual machine with a virtual Linux filesystem layered over an HGFS
> filesystem.
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> ______________________________________________
> R-devel at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-devel

-- 
Peter Dalgaard, Professor,
Center for Statistics, Copenhagen Business School
Solbjerg Plads 3, 2000 Frederiksberg, Denmark
Phone: (+45)38153501
Email: pd.mes at cbs.dk  Priv: PDalgd at gmail.com



[Rd] issue with compiling r6
peter dalgaard