From cdhershberger@dow.com  Tue Apr 17 04:34:06 2001
From: cdhershberger@dow.com (cdhershberger@dow.com)
Date: Tue, 17 Apr 2001 05:34:06 +0200 (MET DST)
Subject: [Rd] cannot allocate vector of size 71773 Kb (PR#915)
Message-ID: <200104170334.FAA19601@pubhealth.ku.dk>

Full_Name: Doug Hershberger
Version: 1.2.2
OS: Red Hat-Linux 7.0
Submission from: (NULL) (216.99.65.36)


In the R FAQ I find the following entry explaining that R no longer has   
problems with memory.

http://cran.r-project.org/doc/FAQ/R-FAQ.html#Why%20does%20R%20run%20out%20of%20of%20memory%3f

However in my installation: R Version 1.2.2  (2001-02-26)

Installed from the red hat RPM on your site on a Red Hat 7.0 i686

I get the following error when working with large data sets:

                > source("/usr/local/genex/rcluster/lib/rcluster/r/hcluster.r");
               > breadth.program("uploaded_data.txt", "average", 10)
                Read 2 items
                Read 8574 items
                Error: cannot allocate vector of size 71773 Kb
                Execution halted

Is there a way to fix this? This is running as part of the GeneX
installation so I would have to dig through to figure out how to give R
more memory.

Besides which I don't think that will work.

Thanks for any insight that you can provide.

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[Rd] cannot allocate vector of size 71773 Kb (PR#915)
cdhershberger@dow.com