From ripley at stats.ox.ac.uk  Thu Mar 24 05:30:31 2011
From: ripley at stats.ox.ac.uk (Prof Brian Ripley)
Date: Thu, 24 Mar 2011 04:30:31 +0000
Subject: [Rd] import question
In-Reply-To: <loom.20110324T011932-297@post.gmane.org>
References: <4D8A85F4.1070507@gmail.com>
	<loom.20110324T011932-297@post.gmane.org>
Message-ID: <alpine.LFD.2.02.1103240417290.25247@gannet.stats.ox.ac.uk>

On Thu, 24 Mar 2011, Ben Bolker wrote:

> Ben Bolker <bbolker <at> gmail.com> writes:
>
>>
>>
>>   I have been struggling all day to import a particular function/method
>> combination (ranef(), which extracts the random effects from a mixed
>> model fit) from the nlme package into another package ... so far without
>> success.
>>
>
>  Answered my own question, finally.
>
>  Apparently an explicit
>
> export(ranef)
>
> is required, even though there is also an
>
> exportPattern("^[^\\.]")
>
> in the NAMESPACE file, which I would have thought would
> export 'ranef' along with everything else ... ?

It exports everything excpet dot-namesin the package's namespace. 
Imports are not in the namespace per se, but in the import environment 
(which is the enclosure of the namespace).  Here is the actual code:

         for (p in nsInfo$exportPatterns)
             exports <- c(ls(env, pattern = p, all.names = TRUE), exports)

So to re-export a function, you need to do so explicitly.

It is consdered good practice not to use exportPattern() (at least, 
not for broadly defined patterns) in production code: see the current 
'Writing R Extensions'.  Otherwise things may change under you (what 
nlme exports has changed recently, hence what import(nlme) brings it 
has).

-- 
Brian D. Ripley,                  ripley at stats.ox.ac.uk
Professor of Applied Statistics,  http://www.stats.ox.ac.uk/~ripley/
University of Oxford,             Tel:  +44 1865 272861 (self)
1 South Parks Road,                     +44 1865 272866 (PA)
Oxford OX1 3TG, UK                Fax:  +44 1865 272595



[Rd] import question
Prof Brian Ripley