From osklyar at ebi.ac.uk  Fri Feb 25 16:05:17 2005
From: osklyar at ebi.ac.uk (Oleg Sklyar)
Date: Fri Feb 25 16:05:36 2005
Subject: [Rd] [R][Rdev] any way to generate "bitmap" (tif, jpeg,
 png etc) files in R CMD BATCH
Message-ID: <421F3EAD.3040607@ebi.ac.uk>

Hi Community,

here is the problem, Linux problem (reported to work on Windows). I need 
to generate graphical output in any of bitmap format under the 'R CMD 
BATCH'. Whereas the script generating png-s works perfectly in the R 
session, such things as X11, png and jpeg are not usable in BATCH (they 
cannot be switched on by --gui-X11 etc) and X11 is prompted to be 
required for png. At the same time, such things as postscript and pdf, 
which are generally X-independent work fine. The problem is that as a 
result I need something previewable in the web browser: png, jpeg. Any 
suggestions how to proceed? Generally I could use command line linux 
tools to convert from almost any bitmpa format to the required png or 
jpeg, but it would be nicer to have them as direct R output.

Kind regards
Oleg

-- 
Dr Oleg Sklyar
European Bioinformatics Institute
Wellcome Trust Genome Campus
Hinxton, Cambridge, CB10 1SD
England
phone/fax  +44(0)1223 49 4478/4468
e-mail osklyar@ebi.ac.uk


[Rd] [R][Rdev] any way to generate "bitmap" (tif, jpeg, png etc) files in R CMD BATCH
Oleg Sklyar