From savicky at cs.cas.cz  Tue Feb 22 13:38:07 2011
From: savicky at cs.cas.cz (Petr Savicky)
Date: Tue, 22 Feb 2011 13:38:07 +0100
Subject: [Rd] error in memCompress() in make check
In-Reply-To: <alpine.LFD.2.02.1102221115330.11838@gannet.stats.ox.ac.uk>
References: <20110222104232.GA20876@cs.cas.cz>
	<alpine.LFD.2.02.1102221115330.11838@gannet.stats.ox.ac.uk>
Message-ID: <20110222123807.GA13609@cs.cas.cz>

On Tue, Feb 22, 2011 at 11:25:50AM +0000, Prof Brian Ripley wrote:
> So it seems that there is something wrong with the liblzma library 
> used on that machine.  Did it use the version supplied with R or an 
> external library (which is the default if one is found)?  My first 
> step would be to force the internal version via --with-system-xz=no.

Thank you for your reply.

I tried 

  ./configure --with-x=no --with-system-xz=no

in a clean R-devel_2011-02-22 and the result of make check is the same.

The commands

  txt <- readLines(file.path(R.home("doc"), "COPYING"))
  txt.xz <- memCompress(txt, "x")

do not produce an error, if the compiled R runs in the same shell,
where "make check" was run. However, they produce the error, if R is
started in a new shell.

The command

  find /usr -name "liblzma*"

has empty output.

Petr Savicky.



[Rd] error in memCompress() in make check
Petr Savicky