From cberry at tajo.ucsd.edu  Wed Sep 12 22:21:37 2007
From: cberry at tajo.ucsd.edu (Charles C. Berry)
Date: Wed, 12 Sep 2007 13:21:37 -0700
Subject: [Rd] installing packages (PR#9907)
In-Reply-To: <20070912165243.337A366952@slim.kubism.ku.dk>
References: <20070912165243.337A366952@slim.kubism.ku.dk>
Message-ID: <Pine.LNX.4.64.0709121312370.25309@tajo.ucsd.edu>

On Wed, 12 Sep 2007, alexander.jerneck at gmail.com wrote:

> Full_Name: Alexander Jerneck
> Version: 2.4.0 (2006-10-03)
> OS: Gentoo (2.6.17-custom kernel)
> Submission from: (NULL) (130.91.92.78)
>
>
> I had trouble installing R packages, either from inside R or from the
> commandline, with R complaining about not finding /usr/bin/pwd
> I have pwd in /bin/ so I created a symlink from /usr/bin/pwd to /bin/pwd and now
> I can install packages. I do not know where the original problem is however.

This is NOT A BUG.

Likely, you do not have /bin on your path. Check

 	Sys.getenv("PATH")


install.packages() works fine on all my Gentoo boxes with R installed as 
per the instructions in

 	$R_HOME/doc/manual/R-admin.html

>
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>

Charles C. Berry                            (858) 534-2098
                                             Dept of Family/Preventive Medicine
E mailto:cberry at tajo.ucsd.edu	            UC San Diego
http://famprevmed.ucsd.edu/faculty/cberry/  La Jolla, San Diego 92093-0901



[Rd] installing packages (PR#9907)
Charles C. Berry