From maechler at stat.math.ethz.ch  Wed Jan 16 09:31:41 2013
From: maechler at stat.math.ethz.ch (Martin Maechler)
Date: Wed, 16 Jan 2013 09:31:41 +0100
Subject: [Rd] R-forge, package dependencies
In-Reply-To: <010c01cdf35f$c5e786e0$51b694a0$@ugent.be>
References: <CAJ55+d+k8b1UCWs-Rpc5obp=AY_FooZDp9JnRaa5cP9Ey9f6WA@mail.gmail.com>
	<50F5B770.9000804@statistik.tu-dortmund.de>
	<010c01cdf35f$c5e786e0$51b694a0$@ugent.be>
Message-ID: <20726.25965.68797.657627@stat.math.ethz.ch>

>>>>> Nick Sabbe <nick.sabbe at ugent.be>
>>>>>     on Tue, 15 Jan 2013 21:34:52 +0100 writes:

    > I have exactly the same issue with a pair of my packages
    > on R-Forge.  I've already notified Stefan, but I mentioned
    > it wasn't urgent for me :)

    > It must have something to do with the R check using a
    > different environment than the build...

notably when using '--as-cran' I think;
this looks like a pretty infelicitous decision to me:

E.g. I can no longer use --as-cran for checking our copula
package (on my own computer), as that suggests Rmpfr and gmp and
these depend on the corresponding external C libraries (mpfr & gmp) 
and these rely on LD_LIBRARY_PATH and that now fails to be
looked at in such circumstances.

To me this somewhat recent change looks like something that
should be re-considered on the R side..

Martin

    > So good hunting, Stefan!
indeed...


    > Nick Sabbe
    > --
    > ping: nick.sabbe at ugent.be link: http://biomath.ugent.be
    > wink: A1.056, Coupure Links 653, 9000 Gent ring:
    > 09/264.59.36

    > -- Do Not Disapprove




    > -----Original Message----- From:
    > r-devel-bounces at r-project.org
    > [mailto:r-devel-bounces at r-project.org] On Behalf Of Uwe
    > Ligges Sent: dinsdag 15 januari 2013 21:09 To: Thomas
    > Lumley Cc: Stefan Theussl; R-devel Subject: Re: [Rd]
    > R-forge, package dependencies



    > On 15.01.2013 20:47, Thomas Lumley wrote:
    >> I have a project on R-forge
    >> (sqlsurvey.r-forge.r-project.org) with two packages,
    >> RMonetDB and sqlsurvey.
    >> 
    >> At the moment, sqlsurvey is listed as failing to build.
    >> The error is on the Linux package check, which says that
    >> RMonetDB is not available:
    >> 
    >> 
    >> * checking package dependencies ... ERROR Package
    >> required but not available: 'RMonetDB'
    >> 
    >> RMonetDB has built successfully: r-forge lists its status
    >> as 'current', with Linux, Windows, and Mac packages
    >> available for download.  The package check for sqlsurvey
    >> on Windows and Mac finds RMonetDB without any problems,
    >> it's just on Linux that it appears to be
    > unavailable.
    >> 
    >> Any suggestions for how to fix this? I've tried uploading
    >> a new version of RMonetDB, but the situation didn't
    >> change: it built successfully, but the Linux check of
    >> sqlsurvey still couldn't find it.


    > I think you have to ask Stefan to check the details.

    > Best, Uwe


    >> -thomas
    >> 
    >> 
    >> 
    >> 
    >> ______________________________________________
    >> R-devel at r-project.org mailing list
    >> https://stat.ethz.ch/mailman/listinfo/r-devel
    >> 

    > ______________________________________________
    > R-devel at r-project.org mailing list
    > https://stat.ethz.ch/mailman/listinfo/r-devel

    > ______________________________________________
    > R-devel at r-project.org mailing list
    > https://stat.ethz.ch/mailman/listinfo/r-devel



[Rd] R-forge, package dependencies
Martin Maechler