From therne@u @end|ng |rom m@yo@edu  Fri Sep  6 14:07:26 2019
From: therne@u @end|ng |rom m@yo@edu (Therneau, Terry M., Ph.D.)
Date: Fri, 06 Sep 2019 07:07:26 -0500
Subject: [Rd] [EXTERNAL] RE: install_github and survival
In-Reply-To: <438D2EC9EAFE5946B2D5864670EA468E01CC779141@MBXP01.ds.man.ac.uk>
References: <438D2EC9EAFE5946B2D5864670EA468E01CC779141@MBXP01.ds.man.ac.uk>
Message-ID: <771925$cbmn84@ironport10.mayo.edu>

Yes, that is exactly the problem.? The code found in the "config" script is never run.? 
But why doesn't it get run?

On 9/6/19 5:44 AM, Georgi Boshnakov wrote:
> I cloned therneau/survival and the installation failed since there is no definition for exported function survfit().
> A file seems to be missing - there is survfit0() and survfit0.R but, compared to CRAN, no survfit.R.
>
> Georgi Boshnakov
>
>
> ----------------------------------------------------------------------
>
> Message: 1
> Date: Thu, 05 Sep 2019 12:53:11 -0500
> From: "Therneau, Terry M., Ph.D." <therneau at mayo.edu>
> To: "r-devel at r-project.org" <r-devel at r-project.org>
> Subject: [Rd] install_github and survival
> Message-ID: <771925$cbifqp at ironport10.mayo.edu>
> Content-Type: text/plain; charset="utf-8"
>
> I treat CRAN as the main repository for survival, but I have also had a github
> (therneau/survival) version for a couple of years.? It has a vignette2 directory, for
> instance, that contains extra vignettes that either take too long to run or depend on
> other packages.? It also gets updated more often than CRAN (though those updates mght not
> be as well tested yet).
>
> In any case, since it is there, people will of course run install_github against it.
> I've added a config script to do the one extra step necessary, but when I try
> install_github it fails.?? I'm clearly doing something wrong.? If someone were willing to
> contribute a fix I would be most grateful.
>
> survival3.1-0 is almost ready for CRAN, by the way.?? Reverse dependency checks of hdnom
> turned up one last thing to repair...
>
>
> Terry Therneau
>
>
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[Rd] [EXTERNAL] RE: install_github and survival
Therneau, Terry M., Ph.D.