From p.dalgaard at biostat.ku.dk  Sat Apr  7 21:41:49 2007
From: p.dalgaard at biostat.ku.dk (Peter Dalgaard)
Date: Sat, 07 Apr 2007 21:41:49 +0200
Subject: [Rd] Orphaned ncvar? (PR#9603)
In-Reply-To: <20070406235902.07C105DEA8@slim.kubism.ku.dk>
References: <20070406235902.07C105DEA8@slim.kubism.ku.dk>
Message-ID: <4617F3FD.2070706@biostat.ku.dk>

chatfield at clio.arc.nasa.gov wrote:
> An orphaned package?  anyone in Switzerland know if there's an  
> alternative?
> Note the email.
> I guess CRAN-R should be notified.
>
> regards, Bob C
>
>   
This appears confused. Where is the bug in R?

I have difficulties seeing even what it is you're trying to achieve, but 
for one thing, manipulating .libPaths is NOT the way to help anything 
find include files and C libraries (LD_LIBRARY_PATH and configure 
options might be). If the issue is that mail to juerg.schmidli bounces, 
how about looking him up on the net?

    -pd
>> The original message was received at Fri, 6 Apr 2007 16:32:57 -0700
>> from vayu.arc.nasa.gov [143.232.122.22]
>>
>>    ----- The following addresses had permanent fatal errors -----
>> <juerg.schmidli at env.ethz.ch>
>>     (reason: 550-Callout verification failed:)
>>
>>    ----- Transcript of session follows -----
>> ... while talking to phil1.ethz.ch.:
>>
>>     
>>>>> DATA
>>>>>
>>>>>           
>> <<< 550-Callout verification failed:
>> <<< 550 550 5.1.1 User unknown
>> 550 5.1.1 <juerg.schmidli at env.ethz.ch>... User unknown
>> <<< 503 valid RCPT command must precede DATA
>> Reporting-MTA: dns; pagent2.arc.nasa.gov
>> Received-From-MTA: DNS; vayu.arc.nasa.gov
>> Arrival-Date: Fri, 6 Apr 2007 16:32:57 -0700
>>
>> Final-Recipient: RFC822; juerg.schmidli at env.ethz.ch
>> Action: failed
>> Status: 5.1.1
>> Remote-MTA: DNS; phil1.ethz.ch
>> Diagnostic-Code: SMTP; 550-Callout verification failed:
>> Last-Attempt-Date: Fri, 6 Apr 2007 16:33:08 -0700
>>     
>
>
>   
>> Could you help? The notes are just too telegraphic.
>>
>> I keep getting missing packages  or missing main in netdcdf messages
>> in my attempts to install.
>>
>> Macintosh OS X (10.4)  this happens to be old-chip PowerPC ...  
>> other install will be new-chip Intel
>>
>>
>> * binaries are listed on all the R mirrors, but they uniformly fail  
>> to work
>>
>> * I've tried to build these from source, but need netcdf.
>>
>> I see this ---
>>
>> Note
>> The NetCDF and the udunits library must be already installed on the  
>> system.
>> Author(s)
>> Pavel Michna
>>
>> but the installs don't work ...at configure stage.
>>
>> I have downloaded netcdf using the fink package manner (debian- 
>> linux like)
>> which creates files in
>> /sw/lib
>> and
>> /sw/include
>>
>> but have not been able to get these recognized by R at compile time,
>> even after using .libPaths("/sw/include")  for the new library and  
>> confirming
>> it with .libPaths()
>>
>> Either they are missing the library or cannot find "main" or  
>> something.
>>
>> If we are to build these ourselves, it would be great to find out  
>> just how
>> to get libraries recognized in the documentation, ... or for there  
>> to be binaries.
>>
>> If you have notes within the .tgz files, I have not found those.
>>
>> Please, help ! ;-)
>> regards, Bob C
>>
>> 	
>>
>>
>> Dr. Robert Chatfield
>> Earth Sciences, MS 245-5
>> NASA Ames Research Center
>> Moffett Field, CA 94035    USA
>>
>> Ph: 650-604-5490  FAX 650-604-3625
>>
>> http://geo.arc.nasa.gov/sgg/chatfield
>>
>>     
>
> 	[[alternative HTML version deleted]]
>
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[Rd] Orphaned ncvar? (PR#9603)
Peter Dalgaard