Instruct: Identify the main and secondary category of Arxiv papers based on the titles and abstracts
Query: Application of Volcano Plots in Analyses of mRNA Differential
  Expressions with Microarrays   Volcano plot displays unstandardized signal (e.g. log-fold-change) against
noise-adjusted/standardized signal (e.g. t-statistic or -log10(p-value) from
the t test). We review the basic and an interactive use of the volcano plot,
and its crucial role in understanding the regularized t-statistic. The joint
filtering gene selection criterion based on regularized statistics has a curved
discriminant line in the volcano plot, as compared to the two perpendicular
lines for the "double filtering" criterion. This review attempts to provide an
unifying framework for discussions on alternative measures of differential
expression, improved methods for estimating variance, and visual display of a
microarray analysis result. We also discuss the possibility to apply volcano
plots to other fields beyond microarray.

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The categories of this paper are: astro-ph
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The categories of this paper are: dg-ga
2
The categories of this paper are: math
21
The categories of this paper are: adap-org
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The categories of this paper are: chao-dyn
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The categories of this paper are: quant-ph
30
The categories of this paper are: q-alg
3
The categories of this paper are: physics
31
The categories of this paper are: ao-sci
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The categories of this paper are: funct-an
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The categories of this paper are: comp-gas
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The categories of this paper are: hep-ph
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The categories of this paper are: atom-ph
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The categories of this paper are: patt-sol
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The categories of this paper are: hep-th
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The categories of this paper are: cs