Update datacard
#1
by mackliao - opened
README.md
CHANGED
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@@ -13,32 +13,38 @@ tags:
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pretty_name: Hu 2007/Reimand 2010 TFKO
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size_categories:
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- 1M<n<10M
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-
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features:
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- name: regulator_locus_tag
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dtype: string
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description: induced transcriptional regulator systematic ID. See hf/BrentLab/yeast_genome_resources
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- name: regulator_symbol
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dtype: string
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description: induced transcriptional regulator common name. If no common name exists, then the `regulator_locus_tag` is used.
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- name: target_locus_tag
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dtype: string
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description: The systematic ID of the feature to which the effect/pvalue is assigned. See hf/BrentLab/yeast_genome_resources
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- name: target_symbol
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dtype: string
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description: The common name of the feature to which the effect/pvalue is assigned. If there is no common name, the `target_locus_tag` is used.
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- name: M
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dtype: float
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description: log₂ fold change (mutant vs wildtype)
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- name: A
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dtype: float
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description: average log₂ intensity of the two channels, a proxy for expression level (This is a guess based on microarray convention -- not specified on holstege site)
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- name: Madj
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dtype: float
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description: M value with the cell cycle signal removed (see paper cited in the introduction above)
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configs:
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- config_name: data
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default: true
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---
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# Hu 2007 / Reimand 2010
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pretty_name: Hu 2007/Reimand 2010 TFKO
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size_categories:
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- 1M<n<10M
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+
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configs:
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- config_name: data
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description: Regulator knockout expression data from Hu 2007 / Reimand 2010
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dataset_type: annotated_features
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data_files:
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- split: train
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path: hu_2007_reimand_2010.parquet
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default: true
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dataset_info:
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features:
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- name: regulator_locus_tag
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+
dtype: string
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+
description: induced transcriptional regulator systematic ID. See hf/BrentLab/yeast_genome_resources
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+
- name: regulator_symbol
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+
dtype: string
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+
description: induced transcriptional regulator common name. If no common name exists, then the `regulator_locus_tag` is used.
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+
- name: target_locus_tag
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+
dtype: string
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+
description: The systematic ID of the feature to which the effect/pvalue is assigned. See hf/BrentLab/yeast_genome_resources
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+
- name: target_symbol
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+
dtype: string
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+
description: The common name of the feature to which the effect/pvalue is assigned. If there is no common name, the `target_locus_tag` is used.
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+
- name: M
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+
dtype: float
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+
description: log₂ fold change (mutant vs wildtype)
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| 42 |
+
- name: A
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| 43 |
+
dtype: float
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+
description: average log₂ intensity of the two channels, a proxy for expression level (This is a guess based on microarray convention -- not specified on holstege site)
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+
- name: Madj
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+
dtype: float
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description: M value with the cell cycle signal removed (see paper cited in the introduction above)
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---
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# Hu 2007 / Reimand 2010
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