Datasets:
systems-genomics-lab
/
greengenes

Dataset card Data Studio Files
xet
Community
1
sequence_id
stringlengths
6
43
domain
stringclasses
2 values
phylum
stringclasses
129 values
class
stringclasses
349 values
order
stringclasses
997 values
family
stringlengths
2
38
genus
stringlengths
2
42
species
stringlengths
10
51
G012271275_1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_4976
Unclassified_Nitrosopumilus_4976
G009843815_1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
VYCS01
VYCS01 sp009843815
RS-GCF-019173545.1-NZ-JABXWD010000280.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosarchaeum
Nitrosarchaeum koreense
HQ331116
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosarchaeum
Nitrosarchaeum koreense
GB-GCA-018334095.1-JAGXTE010000052.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosarchaeum
Nitrosarchaeum koreense
G000220175_1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosarchaeum
Nitrosarchaeum koreense
GB-GCA-013521055.1-JACDOP010000014.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosarchaeum
Nitrosarchaeum koreense
GB-GCA-014193235.1-BJHR01000029.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosarchaeum
Nitrosarchaeum koreense
G000204585_1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosarchaeum
Nitrosarchaeum limnae
G000241145_1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosarchaeum
Nitrosarchaeum limnae
GB-GCA-013867345.1-JACEMW010000007.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Unclassified_Nitrosopumilus_5141
G003248015_1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Unclassified_Nitrosopumilus_5141
G007571005_1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus sp007571135
MK139956
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus piranensis
RS-GCF-014078535.1-NZ-MU078705.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus piranensis
G000875775_1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus piranensis
KX950757
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus cobalaminigenes
RS-GCF-013407145.1-NZ-CP026993.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus cobalaminigenes
G000299365_1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus cobalaminigenes
G000328945_1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus koreensis
G000018465_1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus sp000746765
G000722915_1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus sp000746765
GB-GCA-017855915.1-JAFMFS010000035.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus sp000746765
RS-GCF-006740685.1-NZ-CP035425.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus sp000746765
GB-GCA-001543015.1-LFLC01000014.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus sp002317795
G001541925_1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus sp001541925
GB-GCA-902514275.1-CABXQD010000027.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus sp001437625
RS-GCF-002156965.1-NZ-CP021324.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus sp001437625
GB-GCA-002737445.1-NSIR01000001.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus sp001437625
GB-GCA-002737455.1-NSIS01000012.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus sp001437625
G001437625_1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus sp001437625
GB-GCA-002508395.1-DAKA01000095.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus sp001437625
GB-GCA-905612425.1-CAJQRY010000022.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus sp001437625
GB-GCA-905612295.1-CAJQRN010000022.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus sp001437625
KX950758
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus sp001437625
RS-GCF-013407165.1-NZ-CP026994.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus sp001437625
GB-GCA-016784665.1-JADHUG010000002.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus sp001437625
GB-GCA-902514095.1-CABXPS010000010.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus sp001437625
GB-GCA-905616385.1-CAJQSS010000018.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus sp001437625
G000299395_1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus sediminis
G002494985_1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus sp002506665
G000242875_1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus salaria
G001674955_1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Unclassified_Nitrosopumilus_5141
G000956175_1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Unclassified_Nitrosopumilus_5141
MK139955
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus adriaticus
RS-GCF-014078525.1-NZ-MU078694.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus adriaticus
KX950759
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Nitrosopumilus adriaticus
GB-GCA-013390485.1-JACATI010000009.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Unclassified_Nitrosopumilus_5141
GB-GCA-013390495.1-JACATK010000013.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Nitrosopumilaceae
Nitrosopumilus_5141
Unclassified_Nitrosopumilus_5141
GB-GCA-005877225.1-VBPK01000067.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Unclassified_Nitrososphaerales
Unclassified_Nitrososphaerales
Unclassified_Nitrososphaerales
GB-GCA-003164815.1-PLUF01000057.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Unclassified_Nitrososphaerales
Unclassified_Nitrososphaerales
Unclassified_Nitrososphaerales
G001830115_1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Unclassified_Nitrososphaerales
Unclassified_Nitrososphaerales
Unclassified_Nitrososphaerales
GB-GCA-016871995.1-VHBL01000001.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Unclassified_Nitrososphaerales
Unclassified_Nitrososphaerales
Unclassified_Nitrososphaerales
GB-GCA-013538695.1-JABXGO010000075.1
Archaea
Thermoproteota
Nitrososphaeria_A
Nitrososphaerales
Unclassified_Nitrososphaerales
Unclassified_Nitrososphaerales
Unclassified_Nitrososphaerales
GB-GCA-017601395.1-JAFNIQ010000155.1
Archaea
Thermoproteota
Nitrososphaeria_A
Caldarchaeales
Unclassified_Caldarchaeales
Unclassified_Caldarchaeales
Unclassified_Caldarchaeales
GB-GCA-011605725.1-JAAOZP010000019.1
Archaea
Thermoproteota
Nitrososphaeria_A
Caldarchaeales
Unclassified_Caldarchaeales
Unclassified_Caldarchaeales
Unclassified_Caldarchaeales
GB-GCA-017601345.1-JAFNIT010000036.1
Archaea
Thermoproteota
Nitrososphaeria_A
Caldarchaeales
Unclassified_Caldarchaeales
Unclassified_Caldarchaeales
Unclassified_Caldarchaeales
GB-GCA-017601145.1-JAFNIV010000012.1
Archaea
Thermoproteota
Nitrososphaeria_A
Caldarchaeales
Unclassified_Caldarchaeales
Unclassified_Caldarchaeales
Unclassified_Caldarchaeales
GB-GCA-011371845.1-DRUP01000005.1
Archaea
Thermoproteota
Nitrososphaeria_A
Caldarchaeales
Unclassified_Caldarchaeales
Unclassified_Caldarchaeales
Unclassified_Caldarchaeales
GB-GCA-011363045.1-DTFY01000006.1
Archaea
Thermoproteota
Nitrososphaeria_A
Caldarchaeales
Unclassified_Caldarchaeales
Unclassified_Caldarchaeales
Unclassified_Caldarchaeales
G000270325_1
Archaea
Thermoproteota
Nitrososphaeria_A
Caldarchaeales
Caldarchaeaceae
Caldarchaeum
Caldarchaeum subterraneum_A
G000405685_1
Archaea
Thermoproteota
Nitrososphaeria_A
Caldarchaeales
Wolframiiraptoraceae
Geocrenenecus
Geocrenenecus sp000405685
GB-GCA-011605825.1-JAAOZK010000007.1
Archaea
Thermoproteota
Methanomethylicia
Methanomethylicales
Unclassified_Methanomethylicales
Unclassified_Methanomethylicales
Unclassified_Methanomethylicales
GB-GCA-014361425.1-JACIVO010000024.1
Archaea
Thermoproteota
Methanomethylicia
Methanomethylicales
Methanomethylicaceae
Unclassified_Methanomethylicaceae
Unclassified_Methanomethylicaceae
G004028775_1
Archaea
Thermoproteota
Methanomethylicia
Methanomethylicales
Methanomethylicaceae
Methanosuratincola
Methanosuratincola subterraneus
G011329225_1
Archaea
Thermoproteota
Methanomethylicia
Methanomethylicales
Methanomethylicaceae
Methanomethylicus
Unclassified_Methanomethylicus
G001717025_1
Archaea
Thermoproteota
Methanomethylicia
Methanomethylicales
Methanomethylicaceae
Methanomethylicus
Methanomethylicus oleisabuli
G001717005_1
Archaea
Thermoproteota
Methanomethylicia
Methanomethylicales
Methanomethylicaceae
Methanomethylicus
Methanomethylicus mesodigestus
G000380705_1
Archaea
Thermoproteota
Thermoprotei_A
Gearchaeales
Gearchaeaceae
SCGC-AAA471-B05
SCGC-AAA471-B05 sp000380705
GB-GCA-000494205.1-AWOB01000018.1
Archaea
Thermoproteota
Thermoprotei_A
Gearchaeales
Gearchaeaceae
SCGC-AAA471-B05
SCGC-AAA471-B05 sp000380705
G000371945_1
Archaea
Thermoproteota
Thermoprotei_A
Gearchaeales
Gearchaeaceae
SCGC-AAA471-B05
Unclassified_SCGC-AAA471-B05
G003019615_1
Archaea
Thermoproteota
Thermoprotei_A
Marsarchaeales
Marsarchaeaceae
BE-D
BE-D sp003019595
GB-GCA-003019595.1-NEXD01000001.1
Archaea
Thermoproteota
Thermoprotei_A
Marsarchaeales
Marsarchaeaceae
BE-D
BE-D sp003019595
GB-GCA-003019345.1-NEXJ01000099.1
Archaea
Thermoproteota
Thermoprotei_A
Marsarchaeales
Marsarchaeaceae
BE-D
Unclassified_BE-D
GB-GCA-003019475.1-NEXI01000004.1
Archaea
Thermoproteota
Thermoprotei_A
Marsarchaeales
Marsarchaeaceae
BE-D
Unclassified_BE-D
G000017945_1
Archaea
Thermoproteota
Thermoprotei_A
Sulfolobales
Ignicoccaceae
Ignicoccus
Ignicoccus hospitalis
CP000816
Archaea
Thermoproteota
Thermoprotei_A
Sulfolobales
Ignicoccaceae
Ignicoccus
Ignicoccus hospitalis
G001481685_1
Archaea
Thermoproteota
Thermoprotei_A
Sulfolobales
Ignicoccaceae
Ignicoccus
Ignicoccus islandicus
AJ271794
Archaea
Thermoproteota
Thermoprotei_A
Sulfolobales
Ignicoccaceae
Ignicoccus
Ignicoccus islandicus
G000258425_1
Archaea
Thermoproteota
Thermoprotei_A
Sulfolobales
Fervidicoccaceae
Fervidicoccus
Fervidicoccus fontis
CP003423
Archaea
Thermoproteota
Thermoprotei_A
Sulfolobales
Fervidicoccaceae
Fervidicoccus
Fervidicoccus fontis
CP013011
Archaea
Thermoproteota
Thermoprotei_A
Sulfolobales
Pyrodictiaceae
Pyrodictium
Pyrodictium delaneyi
X99559
Archaea
Thermoproteota
Thermoprotei_A
Sulfolobales
Pyrodictiaceae
Pyrodictium
Pyrodictium occultum
KC139250
Archaea
Thermoproteota
Thermoprotei_A
Sulfolobales
Pyrodictiaceae
Pyrodictium
Pyrodictium occultum
G000015145_1
Archaea
Thermoproteota
Thermoprotei_A
Sulfolobales
Pyrodictiaceae
Hyperthermus
Hyperthermus butylicus
CP000493
Archaea
Thermoproteota
Thermoprotei_A
Sulfolobales
Pyrodictiaceae
Hyperthermus
Hyperthermus butylicus
G000223395_1
Archaea
Thermoproteota
Thermoprotei_A
Sulfolobales
Pyrodictiaceae
Pyrolobus
Pyrolobus fumarii
X99555
Archaea
Thermoproteota
Thermoprotei_A
Sulfolobales
Pyrodictiaceae
Pyrolobus
Pyrolobus fumarii
GB-GCA-015522635.1-WALW01000014.1
Archaea
Thermoproteota
Thermoprotei_A
Sulfolobales
Pyrodictiaceae
Unclassified_Pyrodictiaceae
Unclassified_Pyrodictiaceae
G000591035_1
Archaea
Thermoproteota
Thermoprotei_A
Sulfolobales
Acidilobaceae
Aeropyrum
Aeropyrum camini
G000011125_1
Archaea
Thermoproteota
Thermoprotei_A
Sulfolobales
Acidilobaceae
Aeropyrum
Aeropyrum camini
AP012489
Archaea
Thermoproteota
Thermoprotei_A
Sulfolobales
Acidilobaceae
Aeropyrum
Aeropyrum pernix
D83259
Archaea
Thermoproteota
Thermoprotei_A
Sulfolobales
Acidilobaceae
Aeropyrum
Aeropyrum pernix
X99554
Archaea
Thermoproteota
Thermoprotei_A
Sulfolobales
Acidilobaceae
Aeropyrum
Thermodiscus maritimus
Y07784
Archaea
Thermoproteota
Thermoprotei_A
Sulfolobales
Acidilobaceae
Aeropyrum
Stetteria hydrogenophila
G011367065_1
Archaea
Thermoproteota
Thermoprotei_A
Sulfolobales
Acidilobaceae
Unclassified_Acidilobaceae
Unclassified_Acidilobaceae
G000495695_1
Archaea
Thermoproteota
Thermoprotei_A
Sulfolobales
Acidilobaceae
Acidilobus
Acidilobus sp028276005
G000495735_1
Archaea
Thermoproteota
Thermoprotei_A
Sulfolobales
Acidilobaceae
Acidilobus
Acidilobus sp000495735
CP001742
Archaea
Thermoproteota
Thermoprotei_A
Sulfolobales
Acidilobaceae
Acidilobus
Acidilobus saccharovorans
G000144915_1
Archaea
Thermoproteota
Thermoprotei_A
Sulfolobales
Acidilobaceae
Acidilobus
Acidilobus saccharovorans